RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CYP2E1P05181 493 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-214ENST00000515035 ZNF667Q5HYK9 610 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 DGKHQ86XP1 1220 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 ALKBH8Q96BT7 664 aaKnown RBP14.07□□□□□ -0.16
TCOF1-214ENST00000515035 KIF2CQ99661 725 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 A0A1B0GTH6 734 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 IGF2BP3O00425 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
TCOF1-214ENST00000515035 SERPINI2O75830 405 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 SLFN12LQ6IEE8 588 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 NOP9Q86U38 636 aaKnown RBP14.07□□□□□ -0.16
TCOF1-214ENST00000515035 TEKT4Q8WW24 435 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 STRBPQ96SI9 672 aaKnown RBP14.07□□□□□ -0.16
TCOF1-214ENST00000515035 TRIM51Q9BSJ1 452 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 PCSK1NQ9UHG2 260 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 KCNA1Q09470 495 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 CRYMQ14894 314 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 PTGISQ16647 500 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 HIF1AQ16665 826 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 LONRF1Q17RB8 773 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 CYB5D1Q6P9G0 228 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 FRA10AC1Q70Z53 315 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 SNX19Q92543 992 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 CDHR1Q96JP9 859 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 THTPAQ9BU02 230 aa14.07□□□□□ -0.16
TCOF1-214ENST00000515035 ASAP2O43150 1006 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 NAALADL2Q58DX5 795 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 DAB2IPQ5VWQ8 1189 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 KCNK16Q96T55 309 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 PLEKHG2Q9H7P9 1386 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 DBR1Q9UK59 544 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 ESRRBO95718 433 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 ARSEP51690 589 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 MAP3K10Q02779 954 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 PFKFB3Q16875 520 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 METTL23Q86XA0 190 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 MARCH10Q8NA82 808 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 UNC13BO14795 1591 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 GLI2P10070 1586 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 PIK3R2O00459 728 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 KRT7P08729 469 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 BTKQ06187 659 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 TXNRD1Q16881 649 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 SYDE2Q5VT97 1194 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 RWDD4Q6NW29 188 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 METTL16Q86W50 562 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 NOA1Q8NC60 698 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 ZBTB10Q96DT7 871 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 ADAM33Q9BZ11 813 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 GCOM2Q9BZD3 368 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 BFARQ9NZS9 450 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 RPAP1Q9BWH6 1393 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 PPARGP37231 505 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 INPP5AQ14642 412 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 HLFQ16534 295 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 RHPN2Q8IUC4 686 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 TBC1D10CQ8IV04 446 aa14.06□□□□□ -0.16
TCOF1-214ENST00000515035 INTS2Q9H0H0 1204 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 RPF1Q9H9Y2 349 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 RBM12Q9NTZ6 932 aaKnown RBP14.06□□□□□ -0.16
TCOF1-214ENST00000515035 FAM47DPA6NHR8 397 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 ADCY3O60266 1144 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 MRPL28Q13084 256 aaKnown RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 IMPG1Q17R60 797 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 C4orf33Q8N1A6 199 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 ATL2Q8NHH9 583 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 C16orf96A6NNT2 1141 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 GDF11O95390 407 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 LDHAP00338 332 aaKnown RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 HOXA13P31271 388 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 HADHAP40939 763 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 BCAR1P56945 870 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 HEATR6Q6AI08 1181 aaKnown RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 TEX2Q8IWB9 1127 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 PRPF38AQ8NAV1 312 aaKnown RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 FSD1LQ9BXM9 530 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 IP6K2Q9UHH9 426 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 WDR47O94967 919 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 MECOMQ03112 1051 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 SMAD1Q15797 465 aaKnown RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 FASTKD1Q53R41 847 aaKnown RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 ANKMY2Q8IV38 441 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 RNF139Q8WU17 664 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 ULK4Q96C45 1275 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 ACAP3Q96P50 834 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 CCT7Q99832 543 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 UBE4BO95155 1302 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 CDHR2Q9BYE9 1310 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 B2RBV5 119 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 ZBTB24O43167 697 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 CYP19A1P11511 503 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 FXR1P51114 621 aaKnown RBP eCLIP14.05□□□□□ -0.16
TCOF1-214ENST00000515035 ROR1Q01973 937 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 VPS72Q15906 364 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 RAD9BQ6WBX8 426 aa14.05□□□□□ -0.16
TCOF1-214ENST00000515035 PODNQ7Z5L7 613 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms