RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 TUBB6Q9BUF5 446 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 TGIF2Q9GZN2 237 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 OSBPL2Q9H1P3 480 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 SUDS3Q9H7L9 328 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 SPC25Q9HBM1 224 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 ETNK1Q9HBU6 452 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 LRRC4CQ9HCJ2 640 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 GRHL1Q9NZI5 618 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 NKX1-2Q9UD57 310 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 SEC63Q9UGP8 760 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 CIDEBQ9UHD4 219 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 ADAMTS1Q9UHI8 967 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 TCEAL9Q9UHQ7 104 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 LGALS13Q9UHV8 139 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 NAGPAQ9UK23 515 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 FCF1Q9Y324 198 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 STARD13Q9Y3M8 1113 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 CD2APQ9Y5K6 639 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 USH1CQ9Y6N9 552 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 RPS6KL1Q9Y6S9 549 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 A0A1B0GUL6 1792 aa6.84□□□□□ -1.31
CALCOCO2-224ENST00000514962 NHSL1Q5SYE7 1610 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 WNK3Q9BYP7 1800 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PCDH11YQ9BZA8 1340 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 TMEM120BA0PK00 339 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 MYMKA6NI61 221 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 SIGLEC16A6NMB1 481 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 MINDY4BA8MYZ0 360 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 MIF4GDA9UHW6 222 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ERVV-2B6SEH9 535 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 TTLL1O95922 423 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 FGGP02679 453 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PDHA1P08559 390 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 TMEM253P0C7T8 217 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 KCNA6P17658 529 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 LMNB1P20700 586 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 DNAJA1P31689 397 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PTDSS1P48651 473 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 TUBP50607 506 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PLTPP55058 493 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 HADHBP55084 474 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PTK2Q05397 1052 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 RNASELQ05823 741 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 NR1H3Q13133 447 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 GRB10Q13322 594 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 GRM4Q14833 912 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 NONOQ15233 471 aaKnown RBP eCLIP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 TXNRD1Q16881 649 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 EDRF1Q3B7T1 1238 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ZNF568Q3ZCX4 644 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 TMEM119Q4V9L6 283 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PABPC1LQ4VXU2 614 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 SH2D4BQ5SQS7 431 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ZNF697Q5TEC3 545 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 HHATQ5VTY9 493 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 SPRYD7Q5W111 196 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ZNF746Q6NUN9 644 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 VSTM1Q6UX27 236 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 RGS9BPQ6ZS82 235 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ZNF571Q7Z3V5 609 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ZNF598Q86UK7 904 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 LONP2Q86WA8 852 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 VSIG1Q86XK7 387 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ECHDC2Q86YB7 292 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 NELFCDQ8IXH7 590 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 THEMISQ8N1K5 641 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 FAM133AQ8N9E0 248 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PPFIBP2Q8ND30 876 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 SMC1BQ8NDV3 1235 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 STKLD1Q8NE28 680 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ZNF398Q8TD17 642 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 LRRC8CQ8TDW0 803 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 LARP4BQ92615 738 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PTPRN2Q92932 1015 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ART4Q93070 314 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 OPTNQ96CV9 577 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 UCN2Q96RP3 112 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 TGS1Q96RS0 853 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PLIN2Q99541 437 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 CELF4Q9BZC1 486 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 RAB34Q9BZG1 259 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 MTFR1LQ9H019 292 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 MIS12Q9H081 205 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 SAR1AQ9NR31 198 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 BLOC1S4Q9NUP1 217 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 PCMTD2Q9NV79 361 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 DDX43Q9NXZ2 648 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 NKIRAS1Q9NYS0 192 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 LMCD1Q9NZU5 365 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 DLGAP2Q9P1A6 1054 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 LNPEPQ9UIQ6 1025 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 COMMD3-BMI1R4GMX3 469 aa6.83□□□□□ -1.32
CALCOCO2-224ENST00000514962 ADGRA3Q8IWK6 1321 aa6.82□□□□□ -1.32
CALCOCO2-224ENST00000514962 SYNGAP1Q96PV0 1343 aa6.82□□□□□ -1.32
CALCOCO2-224ENST00000514962 PASKQ96RG2 1323 aa6.82□□□□□ -1.32
CALCOCO2-224ENST00000514962 TOGARAM1Q9Y4F4 1720 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms