RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GAS2L1Q99501 681 aaPredicted RBP9.13□□□□□ -0.95
CCL28-204ENST00000514421 C17orf80Q9BSJ5 609 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 KIFC3Q9BVG8 833 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 TRIM6Q9C030 488 aaPredicted RBP9.13□□□□□ -0.95
CCL28-204ENST00000514421 CCDC113Q9H0I3 377 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 ZHX3Q9H4I2 956 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 AAASQ9NRG9 546 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 RNF19AQ9NV58 838 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 TYW1Q9NV66 732 aaKnown RBP9.13□□□□□ -0.95
CCL28-204ENST00000514421 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.13□□□□□ -0.95
CCL28-204ENST00000514421 TANC1Q9C0D5 1861 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 SZT2Q5T011 3432 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 RFXAPO00287 272 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 OFD1O75665 1012 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 NPTXRO95502 500 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 TPM3P06753 285 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 MAPTP10636 758 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 FGFR1P11362 822 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 GAP43P17677 238 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 BMP6P22004 513 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 ABCD1P33897 745 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 CLCN1P35523 988 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 ZNF75DP51815 510 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 NCKAP1LP55160 1127 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 STRN3Q13033 797 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 MORC3Q14149 939 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 NCAPHQ15003 741 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 PAN2Q504Q3 1202 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 EPC2Q52LR7 807 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 CLLU1OSQ5K130 101 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 SPOUT1Q5T280 376 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 GLB1LQ6UWU2 654 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 AGMOQ6ZNB7 445 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 HAUS6Q7Z4H7 955 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 APBB1IPQ7Z5R6 666 aaPredicted RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 CDR2LQ86X02 465 aaPredicted RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 SMG8Q8ND04 991 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 SLC17A8Q8NDX2 589 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 MYLIPQ8WY64 445 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 LPPQ93052 612 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 DHX58Q96C10 678 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 DNAJC19Q96DA6 116 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 CCDC34Q96HJ3 373 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 ACO2Q99798 780 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 ADPGKQ9BRR6 497 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 PLVAPQ9BX97 442 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 EIF2AQ9BY44 585 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 MRPL9Q9BYD2 267 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 MRPL4Q9BYD3 311 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 KBTBD4Q9NVX7 518 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 LMCD1Q9NZU5 365 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 KANSL3Q9P2N6 904 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 SERTAD1Q9UHV2 236 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 MTUS1Q9ULD2 1270 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 TNFSF13BQ9Y275 285 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 STXBP5LQ9Y2K9 1186 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 ZKSCAN5Q9Y2L8 839 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 IPPQ9Y573 584 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 PCDHA5Q9Y5H7 936 aa9.12□□□□□ -0.95
CCL28-204ENST00000514421 MRPL42Q9Y6G3 142 aaKnown RBP9.12□□□□□ -0.95
CCL28-204ENST00000514421 CNTNAP2Q9UHC6 1331 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 TTLL13PA6NNM8 815 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 SMTNL1A8MU46 457 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 C5orf67F2Z3F1 127 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 H3BNC9 293 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 ZNF500O60304 480 aaPredicted RBP9.11□□□□□ -0.95
CCL28-204ENST00000514421 MYL1P05976 194 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 LINC00271P0C7V0 271 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 IGFBP4P22692 258 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 GTF2BQ00403 316 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 DPYDQ12882 1025 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 GPM6BQ13491 265 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 PNOCQ13519 176 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 HERC4Q5GLZ8 1057 aaPredicted RBP9.11□□□□□ -0.95
CCL28-204ENST00000514421 NOMO2Q5JPE7 1267 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 ATF7IP2Q5U623 682 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 LRRC55Q6ZSA7 311 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 TAS1R3Q7RTX0 852 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 ZNF720Q7Z2F6 126 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 SPRED2Q7Z698 418 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 FAM178BQ8IXR5 827 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 MLKLQ8NB16 471 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 HELQQ8TDG4 1101 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 STAMQ92783 540 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 GSDMAQ96QA5 445 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 TCHPQ9BT92 498 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 TARS2Q9BW92 718 aaKnown RBP9.11□□□□□ -0.95
CCL28-204ENST00000514421 HSD3B7Q9H2F3 369 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 ST6GALNAC4Q9H4F1 302 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 PDZD7Q9H5P4 517 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 CWH43Q9H720 699 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 RSAD1Q9HA92 442 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 MAGEF1Q9HAY2 307 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 PTPRHQ9HD43 1115 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 RRAGDQ9NQL2 400 aaPredicted RBP9.11□□□□□ -0.95
CCL28-204ENST00000514421 PANK4Q9NVE7 773 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms