RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	GREM2	Q9H772	168 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	BCO1	Q9HAY6	547 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	EDAR	Q9UNE0	448 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	GRXCR1	A8MXD5	290 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	PJA2	O43164	708 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	CFB	P00751	764 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	ADH4	P08319	380 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	HK1	P19367	917 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	GPR3	P46089	330 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	FLT3LG	P49771	235 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	SCAND1	P57086	179 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	ERVK-21	P61565	698 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	CDK17	Q00537	523 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	MUM1L1	Q5H9M0	696 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	FNDC7	Q5VTL7	733 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	OR7D4	Q8NG98	312 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	SLC25A43	Q8WUT9	341 aa	Predicted RBP	5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	RIN2	Q8WYP3	895 aa	Predicted RBP	5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	LENG9	Q96B70	501 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	NDC1	Q9BTX1	674 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	ACE2	Q9BYF1	805 aa	Predicted RBP	5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	PUS7L	Q9H0K6	701 aa	Known RBP	5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	VTA1	Q9NP79	307 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	RBM12	Q9NTZ6	932 aa	Known RBP	5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	ZBTB21	Q9ULJ3	1066 aa		5.75	□□□□□ -1.49
MATR3-223	ENST00000514402	SLPI	P03973	132 aa		5.74	□□□□□ -1.49
MATR3-223	ENST00000514402	MTNR1B	P49286	362 aa		5.74	□□□□□ -1.49
MATR3-223	ENST00000514402	SLC25A3	Q00325	362 aa		5.74	□□□□□ -1.49
MATR3-223	ENST00000514402	LHFPL2	Q6ZUX7	228 aa		5.74	□□□□□ -1.49
MATR3-223	ENST00000514402	PRRX2	Q99811	253 aa		5.74	□□□□□ -1.49
MATR3-223	ENST00000514402	CPEB1	Q9BZB8	566 aa	Known RBP	5.74	□□□□□ -1.49
MATR3-223	ENST00000514402	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.74	□□□□□ -1.49
MATR3-223	ENST00000514402	TRIM75P	A6NK02	468 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	TBKBP1	A7MCY6	615 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	AKR1B10	O60218	316 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	ECHS1	P30084	290 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	HMGA2	P52926	109 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	MALL	Q13021	153 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	SP140	Q13342	867 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	FAM47A	Q5JRC9	791 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	TOR2A	Q5JU69	321 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	MBNL2	Q5VZF2	373 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	IGFL4	Q6B9Z1	124 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	ZFPM1	Q8IX07	1006 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	CMIP	Q8IY22	773 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	SYNE4	Q8N205	404 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	TGFBRAP1	Q8WUH2	860 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	HAS1	Q92839	578 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	PGBD4	Q96DM1	585 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	SLC46A2	Q9BY10	475 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	KCNH6	Q9H252	994 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	MMRN2	Q9H8L6	949 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	DNAJC28	Q9NX36	388 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	ATP8A1	Q9Y2Q0	1164 aa		5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	REXO2	Q9Y3B8	237 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-223	ENST00000514402	ZMYM3	Q14202	1370 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	GAGE12B	A1L429	117 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	GAGE12H	A6NDE8	117 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	ENDOD1	O94919	500 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	TGFB2	P61812	414 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	SRSF2	Q01130	221 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	DPT	Q07507	201 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	KLF10	Q13118	480 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	KLF1	Q13351	362 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	FHL2	Q14192	279 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	BMT2	Q1RMZ1	405 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	PRAMEF14	Q5SWL7	426 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	RHOU	Q7L0Q8	258 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	ZNF276	Q8N554	614 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	ZFP28	Q8NHY6	868 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	MDM1	Q8TC05	714 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	FAM193B	Q96PV7	902 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	ADI1	Q9BV57	179 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	MRI	Q9BWK5	157 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	SLC5A4	Q9NY91	659 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	GPRC5B	Q9NZH0	403 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	EIF2B4	Q9UI10	523 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	FZD1	Q9UP38	647 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	SORCS3	Q9UPU3	1222 aa		5.72	□□□□□ -1.49
MATR3-223	ENST00000514402	SBNO2	Q9Y2G9	1366 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	FAM171A2	A8MVW0	826 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	ITGB1	P05556	798 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	SNRPA1	P09661	255 aa	Known RBP	5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	RBP3	P10745	1247 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	IL2RB	P14784	551 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	MCAM	P43121	646 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	MGAT2	Q10469	447 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	EFCAB12	Q6NXP0	572 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	AMOTL1	Q8IY63	956 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	ULK2	Q8IYT8	1036 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	TRMT2A	Q8IZ69	625 aa	Known RBP	5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	HOXB13	Q92826	284 aa	Predicted RBP	5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	CLIP3	Q96DZ5	547 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	CYFIP2	Q96F07	1278 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	TRIM8	Q9BZR9	551 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	SLC2A4RG	Q9NR83	387 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	MOCS1	Q9NZB8	636 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms