RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SENP7Q9BQF6 1050 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 TMEM47Q9BQJ4 181 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 HERC2P3Q9BVR0 1158 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 UBA5Q9GZZ9 404 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 CPVLQ9H3G5 476 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 RXFP1Q9HBX9 757 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 TBC1D13Q9NVG8 400 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 ZMYM2Q9UBW7 1377 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 EML5Q05BV3 1969 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 A0A0U1RQF3 1178 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 XYLBO75191 536 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 STAM2O75886 525 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 HNRNPA1P09651 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
CLDND1-229ENST00000513988 FTH1P19P0C7X4 201 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 GOLGA8HP0CJ92 632 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 GNAT2P19087 354 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 GBP1P32455 592 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 PPARAQ07869 468 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 C4orf17Q53FE4 359 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 NOMO2Q5JPE7 1267 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 RRP12Q5JTH9 1297 aaKnown RBP8.72□□□□□ -1.01
CLDND1-229ENST00000513988 GPATCH4Q5T3I0 446 aaKnown RBP8.72□□□□□ -1.01
CLDND1-229ENST00000513988 PDXDC1Q6P996 788 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 C1orf228Q6PIY5 440 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 PCSK4Q6UW60 755 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 GLB1LQ6UWU2 654 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 LRRC69Q6ZNQ3 347 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 ERC1Q8IUD2 1116 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 GLYCTKQ8IVS8 523 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 PNPLA1Q8N8W4 532 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 MCRS1Q96EZ8 462 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 MSANTD3Q96H12 275 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 NUSAP1Q9BXS6 441 aaKnown RBP8.72□□□□□ -1.01
CLDND1-229ENST00000513988 NACAP1Q9BZK3 213 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 BOLA2Q9H3K6 86 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 ZNF334Q9HCZ1 680 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-229ENST00000513988 TRPV5Q9NQA5 729 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 MAP3K20Q9NYL2 800 aaKnown RBP8.72□□□□□ -1.01
CLDND1-229ENST00000513988 RTEL1Q9NZ71 1219 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 IL17BQ9UHF5 180 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 KCNH3Q9ULD8 1083 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 SLC8A2Q9UPR5 921 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 COL5A1P20908 1838 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-229ENST00000513988 MYH6P13533 1939 aa8.72□□□□□ -1.01
CLDND1-229ENST00000513988 COL4A2P08572 1712 aa8.71□□□□□ -1.01
CLDND1-229ENST00000513988 GOLGA4Q13439 2230 aaKnown RBP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 GSTTP1A0A1W2PQM5 241 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 ERVH48-1M5A8F1 160 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 SMAPO00193 183 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 OPLAHO14841 1288 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 DCLK1O15075 740 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 CCL16O15467 120 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 DHX16O60231 1041 aaKnown RBP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 GDI1P31150 447 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 MRPS9P82933 396 aaKnown RBP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 GHRHRQ02643 423 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 DDX10Q13206 875 aaKnown RBP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 TRIP6Q15654 476 aaKnown RBP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 QRICH1Q2TAL8 776 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 PPM1LQ5SGD2 360 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 LIN9Q5TKA1 542 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 FCHSD1Q86WN1 690 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 KIAA0319LQ8IZA0 1049 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 IFNL3Q8IZI9 196 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 AZI2Q9H6S1 392 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 IL1RAPL2Q9NP60 686 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 GDE1Q9NZC3 331 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 EVLQ9UI08 416 aaPredicted RBP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 DNMT3LQ9UJW3 386 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 FAN1Q9Y2M0 1017 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 MRPS23Q9Y3D9 190 aaKnown RBP8.71□□□□□ -1.02
CLDND1-229ENST00000513988 AHCTF1Q8WYP5 2266 aa8.71□□□□□ -1.02
CLDND1-229ENST00000513988 FBN3Q75N90 2809 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 TRABD2BA6NFA1 517 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 GPAA1O43292 621 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 ALDH2P05091 517 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 SNHG28P0DPA3 235 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 C6P13671 934 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 ENGP17813 658 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 KLRC1P26715 233 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 ATXN3P54252 364 aaPredicted RBP8.7□□□□□ -1.02
CLDND1-229ENST00000513988 PABPC1LQ4VXU2 614 aaKnown RBP8.7□□□□□ -1.02
CLDND1-229ENST00000513988 TRIM61Q5EBN2 209 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 LILRA6Q6PI73 481 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 TAS1R1Q7RTX1 841 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 PRICKLE2Q7Z3G6 844 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 MAP4K3Q8IVH8 894 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 ADGRF4Q8IZF3 695 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 SYNPOQ8N3V7 929 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 PIGKQ92643 395 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 APOL6Q9BWW8 343 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 ZFP14Q9HCL3 533 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 APOBEC2Q9Y235 224 aaKnown RBP8.7□□□□□ -1.02
CLDND1-229ENST00000513988 PCDHB9Q9Y5E1 797 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms