RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 SFNP31947 248 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 MCM5P33992 734 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 LIFRP42702 1097 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
NFKB1-211ENST00000513803 DSC1Q08554 894 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 MTERF2Q49AM1 385 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 XKR3Q5GH77 459 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 JAKMIP3Q5VZ66 844 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 C12orf50Q8NA57 414 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-211ENST00000513803 ITFG1Q8TB96 612 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 RUFY2Q8WXA3 655 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 CRYGNQ8WXF5 182 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 DNASE1L2Q92874 299 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 B3GALT6Q96L58 329 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 NLRP4Q96MN2 994 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 JPH2Q9BR39 696 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-211ENST00000513803 GPR62Q9BZJ7 368 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 LMAN1LQ9HAT1 526 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
NFKB1-211ENST00000513803 DSPP15924 2871 aaKnown RBP12.16□□□□□ -0.46
NFKB1-211ENST00000513803 ARL5CA6NH57 179 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 C1QTNF9BB2RNN3 333 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 SH2B2O14492 632 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-211ENST00000513803 CCL16O15467 120 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 C8AP07357 584 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 C1QTNF9P0C862 333 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 JAK3P52333 1124 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 PTH1RQ03431 593 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 PRR16Q569H4 304 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 FUT10Q6P4F1 479 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 SYNE3Q6ZMZ3 975 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 NPAS3Q8IXF0 933 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 SEPT9Q9UHD8 586 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-211ENST00000513803 FBXW11Q9UKB1 542 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-211ENST00000513803 SPEGQ15772 3267 aa12.16□□□□□ -0.46
NFKB1-211ENST00000513803 TMEM8BA6NDV4 472 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 CHURC1-FNTBB4DL54 471 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 MAFO75444 373 aaPredicted RBP12.15□□□□□ -0.46
NFKB1-211ENST00000513803 TADA2AO75478 443 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 KCNK5O95279 499 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 POU2F2P09086 479 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 ZNF806P0C7X5 589 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
NFKB1-211ENST00000513803 FNTBP49356 437 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 PABPC1LQ4VXU2 614 aaKnown RBP12.15□□□□□ -0.46
NFKB1-211ENST00000513803 UBXN11Q5T124 520 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 STPG1Q5TH74 334 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 LRSAM1Q6UWE0 723 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 CEP68Q76N32 757 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 SRGAP1Q7Z6B7 1085 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 KSR1Q8IVT5 923 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 FAM3CQ92520 227 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 MAP4K1Q92918 833 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 GAD1Q99259 594 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 RIT2Q99578 217 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 LSM14BQ9BX40 385 aaKnown RBP12.15□□□□□ -0.46
NFKB1-211ENST00000513803 BRD9Q9H8M2 597 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 IFT122Q9HBG6 1241 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 ADAM28Q9UKQ2 775 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
NFKB1-211ENST00000513803 COL4A3Q01955 1670 aa12.15□□□□□ -0.46
NFKB1-211ENST00000513803 SHISA7A6NL88 538 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 F8W810 466 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 MLH1P40692 756 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 SATB1Q01826 763 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
NFKB1-211ENST00000513803 UGCGQ16739 394 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 RAB11FIP4Q86YS3 637 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 SPEM1Q8N4L4 309 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 FAM160A2Q8N612 972 aaPredicted RBP12.14□□□□□ -0.47
NFKB1-211ENST00000513803 SMG8Q8ND04 991 aaKnown RBP12.14□□□□□ -0.47
NFKB1-211ENST00000513803 ELSPBP1Q96BH3 223 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 TRMT61BQ9BVS5 477 aaKnown RBP12.14□□□□□ -0.47
NFKB1-211ENST00000513803 PLA2G2FQ9BZM2 168 aa12.14□□□□□ -0.47
NFKB1-211ENST00000513803 RBM28Q9NW13 759 aaKnown RBP12.14□□□□□ -0.47
NFKB1-211ENST00000513803 CHMP2AO43633 222 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 GAS7O60861 476 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 CIITAP33076 1130 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 SCNN1GP51170 649 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 SF3A2Q15428 464 aaKnown RBP12.13□□□□□ -0.47
NFKB1-211ENST00000513803 AXDND1Q5T1B0 1012 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-211ENST00000513803 TANGO2Q6ICL3 276 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 PDXDC1Q6P996 788 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 PRSS55Q6UWB4 352 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-211ENST00000513803 MICU3Q86XE3 530 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 SMC5Q8IY18 1101 aa12.13□□□□□ -0.47
NFKB1-211ENST00000513803 EXOC8Q8IYI6 725 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms