RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 C4orf32Q8N8J7 132 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 VN1R2Q8NFZ6 395 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 DEPTORQ8TB45 409 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 CPB2Q96IY4 423 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 GAD1Q99259 594 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 ADPGKQ9BRR6 497 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 EIF2AQ9BY44 585 aaKnown RBP8.07□□□□□ -1.12
HTT-212ENST00000513639 ZBP1Q9H171 429 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 C11orf16Q9NQ32 467 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 DNAJB4Q9UDY4 337 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 PARP2Q9UGN5 583 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 KIAA1024Q9UPX6 916 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 RBM19Q9Y4C8 960 aaKnown RBP8.07□□□□□ -1.12
HTT-212ENST00000513639 HCFC2Q9Y5Z7 792 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 COL4A4P53420 1690 aaPredicted RBP8.07□□□□□ -1.12
HTT-212ENST00000513639 FAM86C2PA6NEL3 165 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 K7ERI5 159 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 WNT7AO00755 349 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 N4BP3O15049 544 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 LILRB3O75022 631 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 TADA2AO75478 443 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 SOD2P04179 222 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 ADH1AP07327 375 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 NAMPTP43490 491 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 AFF1P51825 1210 aaKnown RBP8.06□□□□□ -1.12
HTT-212ENST00000513639 ZXDAP98168 799 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 RBM10P98175 930 aaKnown RBP8.06□□□□□ -1.12
HTT-212ENST00000513639 CREMQ03060 361 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 DSC1Q08554 894 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 USP41Q3LFD5 358 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 CDCA2Q69YH5 1023 aaPredicted RBP8.06□□□□□ -1.12
HTT-212ENST00000513639 POTEGQ6S5H5 508 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 CYP26C1Q6V0L0 522 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 TRIM67Q6ZTA4 783 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 BMP8AQ7Z5Y6 402 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 COLGALT2Q8IYK4 626 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 IGSF22Q8N9C0 903 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 SLC22A17Q8WUG5 538 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 HDAC7Q8WUI4 952 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 FBXL18Q96ME1 805 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 KLHL5Q96PQ7 755 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 RPS6KC1Q96S38 1066 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 TIPINQ9BVW5 301 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 BHMT2Q9H2M3 363 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 C17orf75Q9HAS0 396 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.06□□□□□ -1.12
HTT-212ENST00000513639 MUTYHQ9UIF7 546 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 PCDHB8Q9UN66 801 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 USTQ9Y2C2 406 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.06□□□□□ -1.12
HTT-212ENST00000513639 PCDHB13Q9Y5F0 798 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
HTT-212ENST00000513639 ZMYM2Q9UBW7 1377 aa8.06□□□□□ -1.12
HTT-212ENST00000513639 WDR87Q6ZQQ6 2873 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 NPTXRO95502 500 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 URODP06132 367 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 THP07101 528 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 CNPP09543 421 aaKnown RBP8.05□□□□□ -1.12
HTT-212ENST00000513639 AKAP5P24588 427 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 PLA2G5P39877 138 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 MLH1P40692 756 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 TOB1P50616 345 aaPredicted RBP8.05□□□□□ -1.12
HTT-212ENST00000513639 SCNN1GP51170 649 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 SMTNP53814 917 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 GRIK3Q13003 919 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 PTPN14Q15678 1187 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 KIAA0319Q5VV43 1072 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 ZBTB33Q86T24 672 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 TMEM173Q86WV6 379 aaPredicted RBP8.05□□□□□ -1.12
HTT-212ENST00000513639 UBALD2Q8IYN6 164 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 AUTS2Q8WXX7 1259 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 PBXIP1Q96AQ6 731 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 ACSF2Q96CM8 615 aaPredicted RBP8.05□□□□□ -1.12
HTT-212ENST00000513639 TMX3Q96JJ7 454 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 DRC1Q96MC2 740 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 ZFP42Q96MM3 310 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 PRRX2Q99811 253 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 APOL6Q9BWW8 343 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 APOL5Q9BWW9 433 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 NT5C3AQ9H0P0 336 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 PLEKHA4Q9H4M7 779 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 GPRC5CQ9NQ84 441 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 CHST7Q9NS84 486 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 DDX19AQ9NUU7 478 aaKnown RBP8.05□□□□□ -1.12
HTT-212ENST00000513639 MIOSQ9NXC5 875 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 SMC3Q9UQE7 1217 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 PRG3Q9Y2Y8 225 aaPredicted RBP8.05□□□□□ -1.12
HTT-212ENST00000513639 HES2Q9Y543 173 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 PCDHB6Q9Y5E3 794 aa8.05□□□□□ -1.12
HTT-212ENST00000513639 ZDBF2Q9HCK1 2354 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 WDR81Q562E7 1941 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 TMEM221A6NGB7 291 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 CCDC169A6NNP5 214 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 M0R296 226 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 B4GALT5O43286 388 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 SLC26A4O43511 780 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 TRAPPC3O43617 180 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 BMP15O95972 392 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms