RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 GPSM2P81274 684 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 DRAP1Q14919 205 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 HPS3Q969F9 1004 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 ANO3Q9BYT9 981 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 INO80BQ9C086 356 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 GOLGA8QA0A0J9YX86 632 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 GOLGA8OA6NCC3 632 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 POTEMA6NI47 508 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 GOLGA8NF8WBI6 632 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 AHCYL1O43865 530 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 KRT37O76014 449 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 NR3C1P04150 777 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 TOB1P50616 345 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 KRT17Q04695 432 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 KLHL38Q2WGJ6 581 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 RABGAP1LQ5R372 815 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 FAM210AQ96ND0 272 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 SENP2Q9HC62 589 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 GDF3Q9NR23 364 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 RHBDL2Q9NX52 303 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 SHOX2O60902 331 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 FTLP02792 175 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 MYBL2P10244 700 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 ITIH2P19823 946 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 ARL4CP56559 192 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 SF3B3Q15393 1217 aaKnown RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 C16orf87Q6PH81 154 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 NSUN4Q96CB9 384 aaKnown RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 CEP95Q96GE4 821 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 SERPINB12Q96P63 405 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 UBN1Q9NPG3 1134 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 PALM3A6NDB9 673 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 E7ENQ6 273 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 PDE2AO00408 941 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 STAM2O75886 525 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 APOEP02649 317 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 TARSP26639 723 aaKnown RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 SNAP25P60880 206 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 BASP1P80723 227 aaKnown RBP11.95□□□□□ -0.5
TCOF1-211ENST00000513346 ZNF844Q08AG5 666 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 BSPRYQ5W0U4 402 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 POTEAQ6S8J7 498 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 AP5M1Q9H0R1 490 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 RXFP1Q9HBX9 757 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 NPHS2Q9NP85 383 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 ZSCAN5CA6NGD5 496 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 H7C0C1 242 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 DNAJC6O75061 913 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 CCND2P30279 289 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 GARSP41250 739 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 ATP5OP48047 213 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 MXI1P50539 228 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 RCN1Q15293 331 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 MIS18BP1Q6P0N0 1132 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 TMEM139Q8IV31 216 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 SLC35G2Q8TBE7 412 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 C1orf54Q8WWF1 131 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 ANAPC7Q9UJX3 599 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 ZNRF3Q9ULT6 936 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 MEGF6O75095 1541 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 ZNF233A6NK53 670 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 CFLARO15519 480 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 KNOP1Q1ED39 458 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 SLC44A4Q53GD3 710 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 IZUMO3Q5VZ72 239 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 PDZD8Q8NEN9 1154 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 PRPF31Q8WWY3 499 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 TATDN2Q93075 761 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 RIOK1Q9BRS2 568 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 HEMGNQ9BXL5 484 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 CNOT8Q9UFF9 292 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 POLR2BP30876 1174 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 SOX5P35711 763 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 PSMD7P51665 324 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 AMPD2Q01433 879 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 HIC1Q14526 733 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 DNAL1Q4LDG9 190 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 PPP1R2P3Q6NXS1 205 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 BZW1Q7L1Q6 419 aaKnown RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 PTF1AQ7RTS3 328 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 ZNF564Q8TBZ8 553 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-211ENST00000513346 ACTRT1Q8TDG2 376 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 KMT5AQ9NQR1 393 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 ARHGAP20Q9P2F6 1191 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 AKT3Q9Y243 479 aa11.94□□□□□ -0.5
TCOF1-211ENST00000513346 SALL1Q9NSC2 1324 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 F8VZ95 297 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 NTSR2O95665 410 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ZFXP17010 805 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 TNFRSF8P28908 595 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ALDH5A1P51649 535 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms