RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MRPL58Q14197 206 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 RASA3Q14644 834 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 CC2D1BQ5T0F9 858 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 MAMDC4Q6UXC1 1216 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 MRGPRGQ86SM5 289 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 ERO1BQ86YB8 467 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 GIMAP8Q8ND71 665 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 NUDT10Q8NFP7 164 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 MRRFQ96E11 262 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 HOOK2Q96ED9 719 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 NUDT11Q96G61 164 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 PAWRQ96IZ0 340 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 PRMT6Q96LA8 375 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 FERD3LQ96RJ6 166 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 AGAP2Q99490 1192 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 PRRX2Q99811 253 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 ARHGAP39Q9C0H5 1083 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 ZNF703Q9H7S9 590 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 WASF3Q9UPY6 502 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 SLC30A1Q9Y6M5 507 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 SSC5DA1L4H1 1573 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 VCANP13611 3396 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 BTBD19C9JJ37 291 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 ADCY3O60266 1144 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 EPHX1P07099 455 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 LMO1P25800 156 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 CSF2RBP32927 897 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 TAGLNQ01995 201 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 PPATQ06203 517 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 INF2Q27J81 1249 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 PROSER3Q2NL68 480 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 GNPTABQ3T906 1256 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 POLNQ7Z5Q5 900 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 ADAT2Q7Z6V5 191 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 ANKRD23Q86SG2 305 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 ZNF513Q8N8E2 541 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 C19orf47Q8N9M1 422 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 CCDC191Q8NCU4 936 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 ZNF428Q96B54 188 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 GUCD1Q96NT3 240 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 CDC5LQ99459 802 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 SPON2Q9BUD6 331 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 MXD3Q9BW11 206 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 ANKRD2Q9GZV1 360 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 KATNBL1Q9H079 304 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 MSL2Q9HCI7 577 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 HYPKQ9NX55 129 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 DBF4Q9UBU7 674 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 TIMM13Q9Y5L4 95 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 DMRT1Q9Y5R6 373 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 MYPNQ86TC9 1320 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 ADGRA2Q96PE1 1338 aa4.68□□□□□ -1.66
PDLIM5-218ENST00000513341 E9PSI1 815 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 ANXA1P04083 346 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 PCCAP05165 728 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 ADH4P08319 380 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 HOXB7P09629 217 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 ACRV1P26436 265 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 CTGFP29279 349 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 RBM25P49756 843 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 DGCR2P98153 550 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 PPIL2Q13356 520 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 VGLL4Q14135 290 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 SMAD2Q15796 467 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 NFE2L2Q16236 605 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 CFAP100Q494V2 611 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 FNDC7Q5VTL7 733 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 E4F1Q66K89 784 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 RUFY4Q6ZNE9 571 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 C15orf52Q6ZUT6 534 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 TAX1BP1Q86VP1 789 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 C1orf210Q8IVY1 113 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 FUKQ8N0W3 1084 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 CRACR2BQ8N4Y2 399 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 ARRDC4Q8NCT1 418 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 IL17DQ8TAD2 202 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 PHOSPHO1Q8TCT1 267 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 NEIL1Q96FI4 390 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 DEFB118Q96PH6 123 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 CDX2Q99626 313 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 CHMP4AQ9BY43 222 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 AURKAIP1Q9NWT8 199 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 TMEFF2Q9UIK5 374 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 TSPYL4Q9UJ04 414 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 DLG5Q8TDM6 1919 aa4.67□□□□□ -1.66
PDLIM5-218ENST00000513341 NCOR1O75376 2440 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 BDP1A6H8Y1 2624 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 ALPK3Q96L96 1907 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 KNG1P01042 644 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 C1SP09871 688 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 IL1R1P14778 569 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 MAKP20794 623 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 ACO1P21399 889 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 FPR2P25090 351 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 FLT3LGP49771 235 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 SLC7A5Q01650 507 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 SCRN1Q12765 414 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 TUBA3CQ13748 450 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms