RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ADGRD2Q7Z7M1 963 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 MRPL41Q8IXM3 137 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 TMEM192Q8IY95 271 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 SLFN12Q8IYM2 578 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 TRMT2AQ8IZ69 625 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 MYOCDQ8IZQ8 938 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 TMEM57Q8N5G2 664 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 FAM169BQ8N8A8 192 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 AFAP1L1Q8TED9 768 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 ISL2Q96A47 359 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 TMEM87BQ96K49 555 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 MSLNLQ96KJ4 702 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 UBL7Q96S82 380 aaPredicted RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 YIPF2Q9BWQ6 316 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 TRIM55Q9BYV6 548 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 UPF3BQ9BZI7 483 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 LNPKQ9C0E8 428 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 EPB41L4AQ9HCS5 686 aaPredicted RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 SSU72Q9NP77 194 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 VTA1Q9NP79 307 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 INCENPQ9NQS7 918 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 CLEC1BQ9P126 229 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 NYAP2Q9P242 653 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 TJP2Q9UDY2 1190 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 KLHL3Q9UH77 587 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 FBXO40Q9UH90 709 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 PCOLCE2Q9UKZ9 415 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 ISY1Q9ULR0 285 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 HDAC5Q9UQL6 1122 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 EXOC6BQ9Y2D4 811 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 NOP58Q9Y2X3 529 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 DNAH14Q0VDD8 3507 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 DMXL1Q9Y485 3027 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 CEP250Q9BV73 2442 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 ACACBO00763 2458 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 ABHD14A-ACY1A0A1B0GW23 586 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 LOC730098B7Z3J9 87 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 PROB1E7EW31 1015 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 DNAJA2O60884 412 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 GLP2RO95838 553 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 MMP3P08254 477 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 ZNF286BP0CG31 522 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 BMP3P12645 472 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 GUCY2CP25092 1073 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 DNAJB1P25685 340 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 ID4P47928 161 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 CPT1AP50416 773 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 OAZ1P54368 228 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 ATP8B2P98198 1209 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 CAMK1Q14012 370 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 BAATQ14032 418 aaPredicted RBP5.67□□□□□ -1.5
HTT-211ENST00000513326 RAB33AQ14088 237 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 SLFN13Q68D06 897 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 TMEM105Q8N8V8 129 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 FAM13CQ8NE31 585 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 DBF4BQ8NFT6 615 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 CAGE1Q8TC20 777 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 AFG1LQ8WV93 481 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 RMDN1Q96DB5 314 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 SEZ6LQ9BYH1 1024 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 PUS7LQ9H0K6 701 aaKnown RBP5.67□□□□□ -1.5
HTT-211ENST00000513326 ACSS3Q9H6R3 686 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 CNNM2Q9H8M5 875 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 FBRSQ9HAH7 460 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 ACTR10Q9NZ32 417 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 HDAC6Q9UBN7 1215 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 STK17AQ9UEE5 414 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 CD207Q9UJ71 328 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 CDH22Q9UJ99 828 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 FEM1BQ9UK73 627 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 RALYQ9UKM9 306 aaKnown RBP5.67□□□□□ -1.5
HTT-211ENST00000513326 CTDP1Q9Y5B0 961 aaPredicted RBP5.67□□□□□ -1.5
HTT-211ENST00000513326 SLC4A4Q9Y6R1 1079 aa5.67□□□□□ -1.5
HTT-211ENST00000513326 MAP1BP46821 2468 aaKnown RBP5.67□□□□□ -1.5
HTT-211ENST00000513326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.66□□□□□ -1.5
HTT-211ENST00000513326 CHURC1-FNTBB4DL54 471 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 NMT2O60551 498 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 NME1P15531 152 aaKnown RBP5.66□□□□□ -1.5
HTT-211ENST00000513326 RAB6AP20340 208 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 SP100P23497 879 aaPredicted RBP5.66□□□□□ -1.5
HTT-211ENST00000513326 MCCP23508 829 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 CTNNB1P35222 781 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 NBL1P41271 181 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 RRP1P56182 461 aaKnown RBP5.66□□□□□ -1.5
HTT-211ENST00000513326 ARHGAP1Q07960 439 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 SIGLEC14Q08ET2 396 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 SLBPQ14493 270 aaKnown RBP eCLIP5.66□□□□□ -1.5
HTT-211ENST00000513326 CBX2Q14781 532 aaPredicted RBP5.66□□□□□ -1.5
HTT-211ENST00000513326 PPP2R5BQ15173 497 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 PPP2R5EQ16537 467 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 NKG7Q16617 165 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 PTPROQ16827 1216 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 ARSHQ5FYA8 562 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 RUFY4Q6ZNE9 571 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 ADSSL1Q8N142 457 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 GMCL1P1Q8NEA9 526 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 VN1R2Q8NFZ6 395 aa5.66□□□□□ -1.5
HTT-211ENST00000513326 HNRNPLLQ8WVV9 542 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms