RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ZNF644Q9H582 1327 aaPredicted RBP5.34□□□□□ -1.55
HTT-210ENST00000512909 FFAR3O14843 346 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 ARHGAP6O43182 974 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 PRC1O43663 620 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 AP1G1O43747 822 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 PLIN1O60240 522 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 LY86O95711 162 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 JUNP05412 331 aaKnown RBP5.34□□□□□ -1.55
HTT-210ENST00000512909 KRT18P05783 430 aaKnown RBP5.34□□□□□ -1.55
HTT-210ENST00000512909 COL6A1P12109 1028 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 SLURP1P55000 103 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 NPEPPSP55786 919 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 RAC3P60763 192 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 NT5DC1Q5TFE4 455 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 TPH2Q8IWU9 490 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 LRRC56Q8IYG6 542 aaPredicted RBP5.34□□□□□ -1.55
HTT-210ENST00000512909 TCEAL8Q8IYN2 117 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 GRAMD1CQ8IYS0 662 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 OR5M3Q8NGP4 307 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 ZNF480Q8WV37 535 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 RTFDC1Q9BY42 306 aaPredicted RBP5.34□□□□□ -1.55
HTT-210ENST00000512909 RHOBTB2Q9BYZ6 727 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 SENP6Q9GZR1 1112 aaPredicted RBP5.34□□□□□ -1.55
HTT-210ENST00000512909 KATNBL1Q9H079 304 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 EPB41L4AQ9HCS5 686 aaPredicted RBP5.34□□□□□ -1.55
HTT-210ENST00000512909 MAN1C1Q9NR34 630 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 TLR9Q9NR96 1032 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.34□□□□□ -1.55
HTT-210ENST00000512909 TMPRSS11EQ9UL52 423 aa5.34□□□□□ -1.55
HTT-210ENST00000512909 CFAP43Q8NDM7 1665 aa5.34□□□□□ -1.56
HTT-210ENST00000512909 HECW1Q76N89 1606 aa5.34□□□□□ -1.56
HTT-210ENST00000512909 ARHGAP5Q13017 1502 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.33□□□□□ -1.56
HTT-210ENST00000512909 NEO1Q92859 1461 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 ERC2O15083 957 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 CAND2O75155 1236 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 SEC24DO94855 1032 aaPredicted RBP5.33□□□□□ -1.56
HTT-210ENST00000512909 CELA3BP08861 270 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 ZNF888P0CJ79 500 aaPredicted RBP5.33□□□□□ -1.56
HTT-210ENST00000512909 GAAP10253 952 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 GYPEP15421 78 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 CSF2RBP32927 897 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 PTPN7P35236 360 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 WNT3AP56704 352 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 ATP2C1P98194 919 aaPredicted RBP5.33□□□□□ -1.56
HTT-210ENST00000512909 NXNQ6DKJ4 435 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 GADL1Q6ZQY3 521 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 TAS1R1Q7RTX1 841 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 ZNF761Q86XN6 746 aaPredicted RBP5.33□□□□□ -1.56
HTT-210ENST00000512909 DRC7Q8IY82 874 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 MAGEB6Q8N7X4 407 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 RELTQ969Z4 430 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 RPL10LQ96L21 214 aaKnown RBP5.33□□□□□ -1.56
HTT-210ENST00000512909 C8orf48Q96LL4 319 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 SLC6A15Q9H2J7 730 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 PRDM12Q9H4Q4 367 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 PRDM11Q9NQV5 511 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 TDP1Q9NUW8 608 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 TMEM140Q9NV12 185 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 HDAC5Q9UQL6 1122 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 ARAP3Q8WWN8 1544 aa5.33□□□□□ -1.56
HTT-210ENST00000512909 POGZQ7Z3K3 1410 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 PPRC1Q5VV67 1664 aaKnown RBP5.32□□□□□ -1.56
HTT-210ENST00000512909 CCDC154A6NI56 674 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 FZD9O00144 591 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 CTNND1O60716 968 aaKnown RBP5.32□□□□□ -1.56
HTT-210ENST00000512909 TOX4O94842 621 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 C8AP07357 584 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 CTSSP25774 331 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 SMARCA1P28370 1054 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 MCAMP43121 646 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 KIR2DL3P43628 341 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 HSPA2P54652 639 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 HLTFQ14527 1009 aaKnown RBP eCLIP5.32□□□□□ -1.56
HTT-210ENST00000512909 UBE3CQ15386 1083 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 TRIM68Q6AZZ1 485 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 LARP4Q71RC2 724 aaKnown RBP eCLIP5.32□□□□□ -1.56
HTT-210ENST00000512909 C14orf80Q86SX3 495 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 CLEC14AQ86T13 490 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 TTC7BQ86TV6 843 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 PQLC1Q8N2U9 271 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 ANKRD53Q8N9V6 530 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 GIMAP8Q8ND71 665 aaPredicted RBP5.32□□□□□ -1.56
HTT-210ENST00000512909 SNX33Q8WV41 574 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 DPF2Q92785 391 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 COA7Q96BR5 231 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 AIFM3Q96NN9 605 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 FAM204AQ9H8W3 233 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 CCDC18Q5T9S5 1454 aa5.32□□□□□ -1.56
HTT-210ENST00000512909 ABCA9Q8IUA7 1624 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 A0A1W2PR48 441 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 A0A1W2PRX2 142 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 DBX1A6NMT0 343 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 VSTM5A8MXK1 200 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 GASTP01350 101 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 VSIG10L2P0DP72 767 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 BMP7P18075 431 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 PDCP20941 246 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 CREMQ03060 361 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms