RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 SIP14410 1827 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 RANBP2P49792 3224 aaKnown RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 A0A0B4J269 797 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 FSD2A1L4K1 749 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 ANKRD63C9JTQ0 380 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 MAPK13O15264 365 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 B4GALT5O43286 388 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 CBFA2T2O43439 604 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 EXTL3O43909 919 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 CSDE1O75534 798 aaKnown RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 CHRNA1P02708 482 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 MCF2P10911 925 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 GHRP10912 638 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 HARSP12081 509 aaKnown RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 ARF4P18085 180 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 MCL1Q07820 350 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 MGAT3Q09327 533 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 AMHR2Q16671 573 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 TCP11X2Q5H9J9 407 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 FBXO47Q5MNV8 452 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 LRRC55Q6ZSA7 311 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 INTS8Q75QN2 995 aaKnown RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 FRMD5Q7Z6J6 570 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 ZC3H3Q8IXZ2 948 aaKnown RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 HACE1Q8IYU2 909 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 GPD1LQ8N335 351 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 WNT8BQ93098 351 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 MED15Q96RN5 788 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 CBWD1Q9BRT8 395 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 PCIF1Q9H4Z3 704 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 CHST12Q9NRB3 414 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 SAMSN1Q9NSI8 373 aaKnown RBP11.84□□□□□ -0.51
PFDN1-204ENST00000512707 AGPAT5Q9NUQ2 364 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 TMEM39AQ9NV64 488 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 PRKAG2Q9UGJ0 569 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 SZT2Q5T011 3432 aa11.84□□□□□ -0.51
PFDN1-204ENST00000512707 A0A1B0GUA9 196 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 ZNF233A6NK53 670 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 H0YGN5 161 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 PES1O00541 588 aaKnown RBP11.83□□□□□ -0.52
PFDN1-204ENST00000512707 OGTO15294 1046 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 STX10O60499 249 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 IQCF3P0C7M6 154 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 ZNF18P17022 549 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 FGFR4P22455 802 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 FAAP100Q0VG06 881 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 NFX1Q12986 1120 aaKnown RBP11.83□□□□□ -0.52
PFDN1-204ENST00000512707 SNRNP35Q16560 246 aaKnown RBP11.83□□□□□ -0.52
PFDN1-204ENST00000512707 HSP90AA4PQ58FG1 418 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 SLC39A4Q6P5W5 647 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 ZBTB33Q86T24 672 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 FAM228AQ86W67 206 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 TMEM40Q8WWA1 233 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 EEF2KMTQ96G04 330 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 CPB2Q96IY4 423 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 FAM213AQ9BRX8 229 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
PFDN1-204ENST00000512707 PDZD7Q9H5P4 517 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 DMAC2Q9NW81 257 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
PFDN1-204ENST00000512707 NOC2LQ9Y3T9 749 aaKnown RBP11.83□□□□□ -0.52
PFDN1-204ENST00000512707 TRIP12Q14669 1992 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 TISP43B9A030 160 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 AKAP3O75969 853 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 SKIP12755 728 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 PROZP22891 400 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 ADSSP30520 456 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 CD52P31358 61 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 RFC2P35250 354 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 RAB27AP51159 221 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 YARSP54577 528 aaKnown RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 LPIN1Q14693 890 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 SURF1Q15526 300 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 LRRC26Q2I0M4 334 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 FKBP15Q5T1M5 1219 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 TCERG1LQ5VWI1 586 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 SEPT8Q92599 483 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 APBB2Q92870 758 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 SAAL1Q96ER3 474 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 TUBGCP2Q9BSJ2 902 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 HTATIP2Q9BUP3 242 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 CCDC94Q9BW85 323 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 IFIH1Q9BYX4 1025 aaKnown RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 TRIM5Q9C035 493 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 CDT1Q9H211 546 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 IKZF4Q9H2S9 585 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 PRDM5Q9NQX1 630 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 RBAKQ9NYW8 714 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 PADI3Q9ULW8 664 aa11.82□□□□□ -0.52
PFDN1-204ENST00000512707 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms