RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 PRIMPOLQ96LW4 560 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 NACC1Q96RE7 527 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 POLR3CQ9BUI4 534 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 GPRC5CQ9NQ84 441 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 PRMT7Q9NVM4 692 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 MED24O75448 989 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 NPTXRO95502 500 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 BRD1O95696 1058 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 AKAP5P24588 427 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 RPA1P27694 616 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 GRIK3Q13003 919 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 CDCA2Q69YH5 1023 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 ELMSAN1Q6PJG2 1045 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 CCDC149Q6ZUS6 474 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 ZBTB8OSQ8IWT0 167 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 ACSF2Q96CM8 615 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 MIOSQ9NXC5 875 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 DPP7Q9UHL4 492 aa16.29■□□□□ 0.2
CCHCR1-229ENST00000512418 TEX28O15482 410 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 VCPP55072 806 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 HMGN5P82970 282 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 DSG1Q02413 1049 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 FAM187BQ17R55 369 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 KIAA0319Q5VV43 1072 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 CDR2LQ86X02 465 aaPredicted RBP16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 FEZF2Q8TBJ5 459 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 COLEC11Q9BWP8 271 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 FZD8Q9H461 694 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 MAN1C1Q9NR34 630 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
CCHCR1-229ENST00000512418 F8W810 466 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 GLUD1P00367 558 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 ASGR2P07307 311 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 AVPR2P30518 371 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 RBM25P49756 843 aaKnown RBP16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 TCF15Q12870 199 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 ZNF174Q15697 407 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 TTC38Q5R3I4 469 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 HAUS3Q68CZ6 603 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 FUT10Q6P4F1 479 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 OTOP3Q7RTS5 596 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 CMASQ8NFW8 434 aaPredicted RBP16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 CHST7Q9NS84 486 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 PARP2Q9UGN5 583 aa16.27■□□□□ 0.2
CCHCR1-229ENST00000512418 C2orf16Q68DN1 1984 aa16.27■□□□□ 0.19
CCHCR1-229ENST00000512418 ARHGEF35A5YM69 484 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 PDGFBP01127 241 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 CYP11B2P19099 503 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 MUTP22033 750 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 TRAPPC10P48553 1259 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 MAPK6Q16659 721 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 PADI6Q6TGC4 694 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 CYP26C1Q6V0L0 522 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 NOSTRINQ8IVI9 506 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 GPR65Q8IYL9 337 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 FAM184AQ8NB25 1140 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 ZSCAN31Q96LW9 406 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 RHOBTB2Q9BYZ6 727 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 KLK14Q9P0G3 267 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 ADAM28Q9UKQ2 775 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 PLXNA3P51805 1871 aa16.26■□□□□ 0.19
CCHCR1-229ENST00000512418 N4BP3O15049 544 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 C1RP00736 705 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 NAMPTP43490 491 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 NUBP1P53384 320 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 CREMQ03060 361 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 TUSC3Q13454 348 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 PRPF4BQ13523 1007 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 PPP2R5AQ15172 486 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 USP41Q3LFD5 358 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 BSNDQ8WZ55 320 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 ADPGKQ9BRR6 497 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 GPR62Q9BZJ7 368 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 SMOC2Q9H3U7 446 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 PDZD7Q9H5P4 517 aa16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 NOL7Q9UMY1 257 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-229ENST00000512418 SF3B1O75533 1304 aaKnown RBP eCLIP16.24■□□□□ 0.199e-7■■■■■ 57.4
CCHCR1-229ENST00000512418 CCDC195A0A1B0GUA6 201 aa16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 TTLL13PA6NNM8 815 aa16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 PRKCBP05771 671 aa16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.196e-7■□□□□ 9.4
CCHCR1-229ENST00000512418 HSP90AA2PQ14568 343 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 TMEM132AQ24JP5 1023 aa16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 DEPTORQ8TB45 409 aa16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 HDAC7Q8WUI4 952 aa16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 B3GALT6Q96L58 329 aa16.24■□□□□ 0.19
CCHCR1-229ENST00000512418 CCDC113Q9H0I3 377 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms