RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MYCP01106 439 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 SUPT20HL2P0C7V6 817 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 MYBL1P10243 752 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 KLRC1P26715 233 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 BASP1P80723 227 aaKnown RBP13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 TRIM65Q6PJ69 517 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 RNF25Q96BH1 459 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 CBWD1Q9BRT8 395 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 MROH8Q9H579 483 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 PCDHB2Q9Y5E7 798 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 ESYT3A0FGR9 886 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 EML1O00423 815 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 TBC1D12O60347 775 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 HLA-DRAP01903 254 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 CYP3A4P08684 503 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 CYP2B6P20813 491 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 BMP6P22004 513 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 TRIM59Q8IWR1 403 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 CCDC110Q8TBZ0 833 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 HAS1Q92839 578 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 DUSP9Q99956 384 aaKnown RBP13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 NCAPGQ9BPX3 1015 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 RANBP17Q9H2T7 1088 aaKnown RBP13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 A0A087X0T9 212 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 CELF2O95319 508 aaKnown RBP13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 PGK2P07205 417 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 FAM228BP0C875 321 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 VSIG1Q86XK7 387 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 SLC35G2Q8TBE7 412 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 SLC5A5Q92911 643 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 ZNF185O15231 689 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 GAS2O43903 313 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 EXTL3O43909 919 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 PTPRAP18433 802 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 PON1P27169 355 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 PPP6R3Q5H9R7 873 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 NIPA1Q7RTP0 329 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 RHOT1Q8IXI2 618 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 SLC30A5Q8TAD4 765 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 PRMT7Q9NVM4 692 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 AFDNP55196 1824 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 M0QYV0 167 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 CXCL11O14625 94 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 OAZ1P54368 228 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 PPP2R5CQ13362 524 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 TFDP2Q14188 446 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 GJB7Q6PEY0 223 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 CBWD2Q8IUF1 395 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 RNPC3Q96LT9 517 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 GLIS2Q9BZE0 524 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 ASNSD1Q9NWL6 643 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 LCMT1Q9UIC8 334 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 TFR2Q9UP52 801 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 AGAP1Q9UPQ3 857 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 INPP5FQ9Y2H2 1132 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 NOC2LQ9Y3T9 749 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 LRRC10BA6NIK2 292 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 WNT7AO00755 349 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 ONECUT3O60422 494 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 C6orf222P0C671 652 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 HERVK_113P62684 666 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 DNERQ8NFT8 737 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 INTS9Q9NV88 658 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 UVRAGQ9P2Y5 699 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 IP6K2Q9UHH9 426 aa13.98□□□□□ -0.17
PCDHA4-202ENST00000512229 EIF3BP55884 814 aaKnown RBP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 NNTQ13423 1086 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 ATF7IP2Q5U623 682 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 HSPH1Q92598 858 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 TNFRSF25Q93038 417 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 KCNMB3Q9NPA1 279 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 ARHGAP25P42331 645 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 GTF2A2P52657 109 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 SLC12A2P55011 1212 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 KIAA1841Q6NSI8 718 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 PDIK1LQ8N165 341 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 PARVAQ9NVD7 372 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 PCSK1NQ9UHG2 260 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 A8MXQ7 604 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 I3L4J1 428 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 SDC4P31431 198 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 CHRNA3P32297 505 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 SLCO1A2P46721 670 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 GKAP1Q5VSY0 366 aaPredicted RBP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 TBC1D31Q96DN5 1066 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 DBR1Q9UK59 544 aaKnown RBP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 PIN4Q9Y237 131 aaKnown RBP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 TACC3Q9Y6A5 838 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 ROBO3Q96MS0 1386 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 PIK3CDO00329 1044 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 RASGRF2O14827 1237 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms