RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CARNS1A5YM72 827 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 NRP1O14786 923 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 PER2O15055 1255 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 DSC1Q08554 894 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 PKP1Q13835 747 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 ATF7IP2Q5U623 682 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 DDX53Q86TM3 631 aaKnown RBP17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 RBM23Q86U06 439 aaKnown RBP17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 GPBP1Q86WP2 473 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 EFHBQ8N7U6 833 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 KRI1Q8N9T8 703 aaKnown RBP17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 TMEM161BQ8NDZ6 487 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 BCL7CQ8WUZ0 217 aaPredicted RBP17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 FAM193BQ96PV7 902 aaPredicted RBP17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 PANK2Q9BZ23 570 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 CLDND1Q9NY35 253 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 SNTG2Q9NY99 539 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 KLK14Q9P0G3 267 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 PARP2Q9UGN5 583 aa17.76■□□□□ 0.43
PDLIM5-216ENST00000511767 HIDE1A8MVS5 230 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 LINC01565O15544 149 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 CXCL14O95715 111 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 MLH1P40692 756 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 NRIP1P48552 1158 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 SCNN1GP51170 649 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 SMTNP53814 917 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 STK38Q15208 465 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 TMC7Q7Z402 723 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 KCNN1Q92952 543 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 PPP2R3CQ969Q6 453 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 TMEM169Q96HH4 297 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 TCF25Q9BQ70 676 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 TARS2Q9BW92 718 aaKnown RBP17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 CXCL16Q9H2A7 254 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 CCDC39Q9UFE4 941 aa17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 TCF20Q9UGU0 1960 aaKnown RBP17.75■□□□□ 0.43
PDLIM5-216ENST00000511767 GRXCR2A6NFK2 248 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 H3BQ06 376 aaPredicted RBP17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 SPTLC2O15270 562 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 PPP6R2O75170 966 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 EFEMP2O95967 443 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 F13A1P00488 732 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 ZNF131P52739 623 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 KCNC3Q14003 757 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 TMEM132AQ24JP5 1023 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 REEP2Q9BRK0 252 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 ADPGKQ9BRR6 497 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 VN1R3Q9BXE9 311 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 MRPL4Q9BYD3 311 aaKnown RBP17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 LARSQ9P2J5 1176 aaKnown RBP17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 ODF2LQ9ULJ1 636 aa17.74■□□□□ 0.43
PDLIM5-216ENST00000511767 PLXNA4Q9HCM2 1894 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 ABLIM1O14639 778 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 MAPTP10636 758 aaKnown RBP17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 PROZP22891 400 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 DUSP6Q16828 381 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 PLPP4Q5VZY2 271 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 TMEM184AQ6ZMB5 413 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 EP400NLQ6ZTU2 488 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 RASSF8Q8NHQ8 419 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 ADAMTS19Q8TE59 1207 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 ZBTB45Q96K62 511 aaPredicted RBP17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 ZDHHC9Q9Y397 364 aa17.73■□□□□ 0.43
PDLIM5-216ENST00000511767 PHLPP2Q6ZVD8 1323 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 ZMYM2Q9UBW7 1377 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 A0A087X0B3 334 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 C2orf71A6NGG8 1288 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 PTGESO14684 152 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 LILRB3O75022 631 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 YEATS4O95619 227 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 BRD1O95696 1058 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 CTSAP10619 480 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 NCKAP1LP55160 1127 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 PUS10Q3MIT2 529 aaKnown RBP17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 DCAF4L1Q3SXM0 396 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 AXDND1Q5T1B0 1012 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 ALKAL1Q6UXT8 129 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 HAUS6Q7Z4H7 955 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 MYCT1Q8N699 235 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 MSLNLQ96KJ4 702 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 NECAB3Q96P71 396 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 FIZ1Q96SL8 496 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 CDCA3Q99618 268 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 COLEC11Q9BWP8 271 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 ZBP1Q9H171 429 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 ENTPD7Q9NQZ7 604 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 STK17AQ9UEE5 414 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 RCOR1Q9UKL0 485 aa17.72■□□□□ 0.43
PDLIM5-216ENST00000511767 GDAQ9Y2T3 454 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms