RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 C17orf75Q9HAS0 396 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 KMT5AQ9NQR1 393 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 INPP5FQ9Y2H2 1132 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 NT5C1B-RDH14C9J2C7 533 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 ZNF623O75123 536 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 OFD1O75665 1012 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 ERLIN2O94905 339 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 EDN1P05305 212 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 ARF4P18085 180 aaPredicted RBP17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 LAG3P18627 525 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 KCNA5P22460 613 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 ERVFC1P60507 584 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 TMEM173Q86WV6 379 aaPredicted RBP17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 ZBTB8OSQ8IWT0 167 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 THNSL1Q8IYQ7 743 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 ADAMTS19Q8TE59 1207 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 SPIRE2Q8WWL2 714 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 FIZ1Q96SL8 496 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 PANK4Q9NVE7 773 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 ARHGAP28Q9P2N2 729 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 HES2Q9Y543 173 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
SH3TC1-220ENST00000511002 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 GOLGA6L22H0YM25 854 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 H3BQ06 376 aaPredicted RBP17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 K7ENM7 598 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 LINC01565O15544 149 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 KINO60870 393 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 GAP43P17677 238 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 NMT1P30419 496 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 RAB27AP51159 221 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 NCKAP1LP55160 1127 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 DLX2Q07687 328 aaPredicted RBP17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 COASYQ13057 564 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 COL19A1Q14993 1142 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 TAS1R3Q7RTX0 852 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 MRPL10Q7Z7H8 261 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 TIGD1Q96MW7 591 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 FGFBP2Q9BYJ0 223 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 TBC1D13Q9NVG8 400 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 TBC1D7Q9P0N9 293 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 TTC28Q96AY4 2481 aa17.08■□□□□ 0.32
SH3TC1-220ENST00000511002 CUL9Q8IWT3 2517 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 KLRC4O43908 158 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 TRAK2O60296 914 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 PRKCBP05771 671 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 MAPTP10636 758 aaKnown RBP17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 LTBRP36941 435 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 SMTNP53814 917 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 DPYDQ12882 1025 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 PNOCQ13519 176 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 POSTNQ15063 836 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 HERC4Q5GLZ8 1057 aaPredicted RBP17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 NOMO2Q5JPE7 1267 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 UNC13DQ70J99 1090 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 ZNF280BQ86YH2 543 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 FAM178BQ8IXR5 827 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 PABPC5Q96DU9 382 aaKnown RBP17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 ZNF558Q96NG5 402 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 NTPCRQ9BSD7 190 aaKnown RBP17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 FZD8Q9H461 694 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 IGFLR1Q9H665 355 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 AAASQ9NRG9 546 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 CLDND1Q9NY35 253 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 DNAJB4Q9UDY4 337 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 IPPQ9Y573 584 aa17.07■□□□□ 0.32
SH3TC1-220ENST00000511002 TBX10O75333 385 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 SKIP12755 728 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 CASP5P51878 434 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 EFNA5P52803 228 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 BCAR1P56945 870 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 RBM10P98175 930 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 MAPK6Q16659 721 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 KANK3Q6NY19 840 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 NOTUMQ6P988 496 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 GLB1LQ6UWU2 654 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 HAUS6Q7Z4H7 955 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 RBM23Q86U06 439 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 APOL6Q9BWW8 343 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms