RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 CCDC149Q6ZUS6 474 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 CATSPER3Q86XQ3 398 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 FBXL6Q8N531 539 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 RABGGTAQ92696 567 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 ACSF2Q96CM8 615 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-204ENST00000509994 IFT74Q96LB3 600 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 ZSCAN31Q96LW9 406 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-204ENST00000509994 KLHL5Q96PQ7 755 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 ADPGKQ9BRR6 497 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 LLPHQ9BRT6 129 aaKnown RBP11.22□□□□□ -0.61
SCARB2-204ENST00000509994 HERC2P3Q9BVR0 1158 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 C2orf40Q9H1Z8 148 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 KCNH6Q9H252 994 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 FOXP1Q9H334 677 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-204ENST00000509994 MAN1C1Q9NR34 630 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 SH2B1Q9NRF2 756 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-204ENST00000509994 PRMT7Q9NVM4 692 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-204ENST00000509994 LIMD1Q9UGP4 676 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 GIT1Q9Y2X7 761 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 IRAK3Q9Y616 596 aa11.22□□□□□ -0.61
SCARB2-204ENST00000509994 MYH11P35749 1972 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 N4BP3O15049 544 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 TADA2AO75478 443 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 GLUD1P00367 558 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 PRKCBP05771 671 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 ASGR2P07307 311 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCARB2-204ENST00000509994 CLCN4P51793 760 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 POU5F1BQ06416 359 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 GRIK3Q13003 919 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 PPP2R5AQ15172 486 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 MAPK6Q16659 721 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 MCTP1Q6DN14 999 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 IFNLR1Q8IU57 520 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-204ENST00000509994 NOSTRINQ8IVI9 506 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 COLGALT2Q8IYK4 626 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 HASPINQ8TF76 798 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 SLC22A17Q8WUG5 538 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 POLR3CQ9BUI4 534 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-204ENST00000509994 RAB34Q9BZG1 259 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 DPP7Q9UHL4 492 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 KIF3AQ9Y496 699 aa11.21□□□□□ -0.61
SCARB2-204ENST00000509994 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.62
SCARB2-204ENST00000509994 TRIP11Q15643 1979 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 CASTOR2A6NHX0 329 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 F8W810 466 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 SPATA31D3P0C874 917 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 SPATA31C1P0DKV0 1188 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 ATXN8OSP0DMR3 200 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 RFX1P22670 979 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 RPA1P27694 616 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 GBP2P32456 591 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-204ENST00000509994 PTPN5P54829 565 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 ORC2Q13416 577 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-204ENST00000509994 NBR1Q14596 966 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 ZRSR1Q15695 479 aaKnown RBP11.2□□□□□ -0.62
SCARB2-204ENST00000509994 AMHR2Q16671 573 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 SPATA31D4Q6ZUB0 917 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 OTOP3Q7RTS5 596 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 TAS1R1Q7RTX1 841 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 BMP8AQ7Z5Y6 402 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 CEP57Q86XR8 500 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 PALB2Q86YC2 1186 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 UBALD2Q8IYN6 164 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 SNX29Q8TEQ0 813 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-204ENST00000509994 B3GALT6Q96L58 329 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 PRIMPOLQ96LW4 560 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 PRRX2Q99811 253 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 MARCH5Q9NX47 278 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 LRWD1Q9UFC0 647 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 ADAM28Q9UKQ2 775 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 GDAQ9Y2T3 454 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
SCARB2-204ENST00000509994 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCARB2-204ENST00000509994 CCDC195A0A1B0GUA6 201 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 CCDC169A6NNP5 214 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 INPPL1O15357 1258 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 TEX28O15482 410 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 BRD1O95696 1058 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 NAMPTP43490 491 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 MRE11P49959 708 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 VCPP55072 806 aaKnown RBP11.19□□□□□ -0.62
SCARB2-204ENST00000509994 CREMQ03060 361 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 DSC1Q08554 894 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 USP41Q3LFD5 358 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 IER5LQ5T953 404 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 FUT10Q6P4F1 479 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 APBB1IPQ7Z5R6 666 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-204ENST00000509994 GPR149Q86SP6 731 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 FBXO18Q8NFZ0 1043 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 BSNDQ8WZ55 320 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
SCARB2-204ENST00000509994 KIFC3Q9BVG8 833 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 BHMT2Q9H2M3 363 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms