RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	ARHGEF19	Q8IW93	802 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	GPD1L	Q8N335	351 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	METTL13	Q8N6R0	699 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	OLIG1	Q8TAK6	271 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	PARD3B	Q8TEW8	1205 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	BICD1	Q96G01	975 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	NLRP4	Q96MN2	994 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	FAM213A	Q9BRX8	229 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	GPR88	Q9GZN0	384 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	FZD8	Q9H461	694 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	IFT122	Q9HBG6	1241 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	SETD4	Q9NVD3	440 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	GCNT4	Q9P109	453 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	PLAGL2	Q9UPG8	496 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411	EPN1	Q9Y6I3	576 aa	Predicted RBP	11	□□□□□ -0.65
FBXO38-215	ENST00000509411	PTPRJ	Q12913	1337 aa		11	□□□□□ -0.65
FBXO38-215	ENST00000509411		A0A087WZ62	844 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411		A0A0B4J269	797 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	RCCD1	A6NED2	376 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	GAS2	O43903	313 aa	Known RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	EXTL3	O43909	919 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	NDUFA10	O95299	355 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	VTN	P04004	478 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	PRKCB	P05771	671 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	MYL3	P08590	195 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	SMIM10L2A	P0DMW4	78 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	SMIM10L2B	P0DMW5	78 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	KRT13	P13646	458 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	UCHL3	P15374	230 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	EIF4A3	P38919	411 aa	Known RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	TNFSF9	P41273	254 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	ACOT2	P49753	483 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	PSEN2	P49810	448 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	JAM2	P57087	298 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	ZNF200	P98182	395 aa	Predicted RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	CDK17	Q00537	523 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	MYL7	Q01449	175 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	STRN3	Q13033	797 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	ARHGEF6	Q15052	776 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	AMHR2	Q16671	573 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	ASTE1	Q2TB18	679 aa	Predicted RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	PHLDB3	Q6NSJ2	640 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	RUFY4	Q6ZNE9	571 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	CDR2L	Q86X02	465 aa	Predicted RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	KIAA0319L	Q8IZA0	1049 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	EHBP1	Q8NDI1	1231 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	CD99L2	Q8TCZ2	262 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	LMBR1	Q8WVP7	490 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	KAT5	Q92993	513 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	CCDC127	Q96BQ5	260 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	ACO2	Q99798	780 aa	Known RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	PTPRH	Q9HD43	1115 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	TRIM10	Q9UDY6	481 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	KCNG1	Q9UIX4	513 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	AGO2	Q9UKV8	859 aa	Known RBP	10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	PTPN22	Q9Y2R2	807 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	CNTNAP2	Q9UHC6	1331 aa		10.99	□□□□□ -0.65
FBXO38-215	ENST00000509411	MAGEB2	O15479	319 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	MEFV	O15553	781 aa	Predicted RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	NRDC	O43847	1150 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	HARS	P12081	509 aa	Known RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	PROZ	P22891	400 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	CCND3	P30281	292 aa	Predicted RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	CHMP4BP1	P59074	171 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	ADAM17	P78536	824 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	MXD4	Q14582	209 aa	Predicted RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	MFSD10	Q14728	455 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	KIAA0753	Q2KHM9	967 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	PRPF38B	Q5VTL8	546 aa	Known RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	ZPBP2	Q6X784	338 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	C15orf39	Q6ZRI6	1047 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	CACNA2D4	Q7Z3S7	1137 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	IRF2BP2	Q7Z5L9	587 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	ZBTB33	Q86T24	672 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	TMEM130	Q8N3G9	435 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	TMC2	Q8TDI7	906 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	IQCD	Q96DY2	449 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	JPH2	Q9BR39	696 aa	Predicted RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	IRX2	Q9BZI1	471 aa	Predicted RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	CDHR5	Q9HBB8	845 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	ANKFY1	Q9P2R3	1169 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	DNAJC12	Q9UKB3	198 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	ZNF215	Q9UL58	517 aa	Predicted RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411		Q9Y3F1	56 aa		10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.98	□□□□□ -0.65
FBXO38-215	ENST00000509411	EIF3CL	B5ME19	914 aa	Known RBP	10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	ACKR2	O00590	384 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	PMM2	O15305	246 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	ASAP2	O43150	1006 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	C4BPA	P04003	597 aa	Known RBP	10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	AKR1A1	P14550	325 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	ELN	P15502	786 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	FGFR4	P22455	802 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	GPC3	P51654	580 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	EFNA5	P52803	228 aa		10.97	□□□□□ -0.65
FBXO38-215	ENST00000509411	CLDN10	P78369	228 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms