RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CCDC113Q9H0I3 377 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 C2orf40Q9H1Z8 148 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 RSAD1Q9HA92 442 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 NGRNQ9NPE2 291 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 TBC1D13Q9NVG8 400 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 KBTBD4Q9NVX7 518 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 KANSL3Q9P2N6 904 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 LZTS1Q9Y250 596 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 PCDHGC5Q9Y5F6 944 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 ANK1P16157 1881 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 A0A1W2PQ27 194 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 A0A1W2PQ64 194 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 A0A1W2PQD8 194 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 FRMD3A2A2Y4 597 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 CARNS1A5YM72 827 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 GRXCR2A6NFK2 248 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 CCDC169A6NNP5 214 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 MEIS3P2A8K0S8 358 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 LINC01565O15544 149 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 B4GALT5O43286 388 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 SLC26A4O43511 780 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 KLRC4O43908 158 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 NR1I2O75469 434 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 NPTXRO95502 500 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 POMCP01189 267 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 ALDH2P05091 517 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 IL9P15248 144 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 ARF4P18085 180 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 CASP5P51878 434 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 ZNF131P52739 623 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 ADAM15Q13444 863 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 MAPK6Q16659 721 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 UBXN11Q5T124 520 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 RRAGBQ5VZM2 374 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 CDCA2Q69YH5 1023 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 SLC27A1Q6PCB7 646 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 AGMOQ6ZNB7 445 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 MRPL10Q7Z7H8 261 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 GPBP1Q86WP2 473 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 CDR2LQ86X02 465 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 FMR1NBQ8N0W7 255 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 SLC39A11Q8N1S5 342 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 EFHBQ8N7U6 833 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 FSIP1Q8NA03 581 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 KIFAP3Q92845 792 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 EIF2AQ9BY44 585 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 NFKBIZQ9BYH8 718 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 SCAND2PQ9GZW5 306 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 NT5C3AQ9H0P0 336 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 CXCL16Q9H2A7 254 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 PRMT7Q9NVM4 692 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 CD207Q9UJ71 328 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 KCNH3Q9ULD8 1083 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 IPPQ9Y573 584 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 PDCD11Q14690 1871 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 NLRC5Q86WI3 1866 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 MYO7AQ13402 2215 aa9.63□□□□□ -0.87
PDLIM5-213ENST00000509357 FSD2A1L4K1 749 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 ABLIM1O14639 778 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 MEFVO15553 781 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 CXCL14O95715 111 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 PRKCBP05771 671 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 GALTP07902 379 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 MLH1P40692 756 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 OR1G1P47890 313 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 NPTX2P47972 431 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 DLX2Q07687 328 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 EHHADHQ08426 723 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 PRPF4BQ13523 1007 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 CUL4BQ13620 913 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 SMC1AQ14683 1233 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 CTC1Q2NKJ3 1217 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 LLGL2Q6P1M3 1020 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 DYMQ7RTS9 669 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 VPS52Q8N1B4 723 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 SMG8Q8ND04 991 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 DDX12PQ92771 950 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 ERCC4Q92889 916 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 CALML4Q96GE6 196 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 GAD1Q99259 594 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 CDCA3Q99618 268 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 ADPGKQ9BRR6 497 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 STRA6Q9BX79 667 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 HAPLN2Q9GZV7 340 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 BLZF1Q9H2G9 400 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 NRDE2Q9H7Z3 1164 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 LMBRD1Q9NUN5 540 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 DNAJB4Q9UDY4 337 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 STK17AQ9UEE5 414 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 FAN1Q9Y2M0 1017 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 HES2Q9Y543 173 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 RALGAPA2Q2PPJ7 1873 aa9.62□□□□□ -0.87
PDLIM5-213ENST00000509357 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 ARL5CA6NH57 179 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 SPDYE4A6NLX3 237 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms