RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 FAN1Q9Y2M0 1017 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 XIRP2A4UGR9 3374 aa17.77■□□□□ 0.43
PDLIM5-212ENST00000509333 KIAA1671Q9BY89 1806 aa17.77■□□□□ 0.43
PDLIM5-212ENST00000509333 CARNS1A5YM72 827 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 NRP1O14786 923 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 PER2O15055 1255 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 DSC1Q08554 894 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 PKP1Q13835 747 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 ATF7IP2Q5U623 682 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 DDX53Q86TM3 631 aaKnown RBP17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 RBM23Q86U06 439 aaKnown RBP17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 GPBP1Q86WP2 473 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 EFHBQ8N7U6 833 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 KRI1Q8N9T8 703 aaKnown RBP17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 TMEM161BQ8NDZ6 487 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 BCL7CQ8WUZ0 217 aaPredicted RBP17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 FAM193BQ96PV7 902 aaPredicted RBP17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 PANK2Q9BZ23 570 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 CLDND1Q9NY35 253 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 SNTG2Q9NY99 539 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 KLK14Q9P0G3 267 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 PARP2Q9UGN5 583 aa17.76■□□□□ 0.43
PDLIM5-212ENST00000509333 HIDE1A8MVS5 230 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 LINC01565O15544 149 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 CXCL14O95715 111 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 MLH1P40692 756 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 NRIP1P48552 1158 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 SCNN1GP51170 649 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 SMTNP53814 917 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 STK38Q15208 465 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 TMC7Q7Z402 723 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 KCNN1Q92952 543 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 PPP2R3CQ969Q6 453 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 TMEM169Q96HH4 297 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 TCF25Q9BQ70 676 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 TARS2Q9BW92 718 aaKnown RBP17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 CXCL16Q9H2A7 254 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 CCDC39Q9UFE4 941 aa17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 TCF20Q9UGU0 1960 aaKnown RBP17.75■□□□□ 0.43
PDLIM5-212ENST00000509333 GRXCR2A6NFK2 248 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 H3BQ06 376 aaPredicted RBP17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 SPTLC2O15270 562 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 PPP6R2O75170 966 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 EFEMP2O95967 443 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 F13A1P00488 732 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 ZNF131P52739 623 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 KCNC3Q14003 757 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 TMEM132AQ24JP5 1023 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 REEP2Q9BRK0 252 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 ADPGKQ9BRR6 497 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 VN1R3Q9BXE9 311 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 MRPL4Q9BYD3 311 aaKnown RBP17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 LARSQ9P2J5 1176 aaKnown RBP17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 ODF2LQ9ULJ1 636 aa17.74■□□□□ 0.43
PDLIM5-212ENST00000509333 PLXNA4Q9HCM2 1894 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 ABLIM1O14639 778 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 MAPTP10636 758 aaKnown RBP17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 PROZP22891 400 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 DUSP6Q16828 381 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 PLPP4Q5VZY2 271 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 TMEM184AQ6ZMB5 413 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 EP400NLQ6ZTU2 488 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 RASSF8Q8NHQ8 419 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 ADAMTS19Q8TE59 1207 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 ZBTB45Q96K62 511 aaPredicted RBP17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 ZDHHC9Q9Y397 364 aa17.73■□□□□ 0.43
PDLIM5-212ENST00000509333 PHLPP2Q6ZVD8 1323 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 ZMYM2Q9UBW7 1377 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 A0A087X0B3 334 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 C2orf71A6NGG8 1288 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 PTGESO14684 152 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 LILRB3O75022 631 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 YEATS4O95619 227 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 BRD1O95696 1058 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 CTSAP10619 480 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 NCKAP1LP55160 1127 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 PUS10Q3MIT2 529 aaKnown RBP17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 DCAF4L1Q3SXM0 396 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 AXDND1Q5T1B0 1012 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 ALKAL1Q6UXT8 129 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 HAUS6Q7Z4H7 955 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 MYCT1Q8N699 235 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 MSLNLQ96KJ4 702 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 NECAB3Q96P71 396 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 FIZ1Q96SL8 496 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 CDCA3Q99618 268 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 COLEC11Q9BWP8 271 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 ZBP1Q9H171 429 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 ENTPD7Q9NQZ7 604 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms