RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ITGB3BPQ13352 177 aaPredicted RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 COL9A3Q14050 684 aaPredicted RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 DUSP6Q16828 381 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 PAN2Q504Q3 1202 aaKnown RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 CEP55Q53EZ4 464 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 PDE12Q6L8Q7 609 aaKnown RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 ABHD15Q6UXT9 468 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 LINC00114Q6XXX2 140 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 CAPN12Q6ZSI9 719 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 RBM23Q86U06 439 aaKnown RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 KIAA0319LQ8IZA0 1049 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 FANCBQ8NB91 859 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 ZNF417Q8TAU3 575 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 RASGRP4Q8TDF6 673 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 TRAPPC12Q8WVT3 735 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 ZNF587Q96SQ5 575 aaPredicted RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 TLE6Q9H808 572 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 ERVK-5Q9HDB9 667 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 RGS18Q9NS28 235 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 C1orf112Q9NSG2 853 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 DNAJB12Q9NXW2 375 aaKnown RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 SLC6A14Q9UN76 642 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 NOC2LQ9Y3T9 749 aaKnown RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 PCDHB7Q9Y5E2 793 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 PCDHB12Q9Y5F1 795 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 RBM8AQ9Y5S9 174 aaKnown RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 KMT2EQ8IZD2 1858 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 hCG_1642624A0A1W2PR95 340 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 CCDC69A6NI79 296 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 TNFRSF10BO14763 440 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 FSCN2O14926 492 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 HBP1O60381 514 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 SASH3O75995 380 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 CSPG5O95196 566 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 FOSP01100 380 aaPredicted RBP9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 RXRAP19793 462 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 KLRC1P26715 233 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 ERVFC1P60507 584 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 SIGLEC14Q08ET2 396 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMEM266Q2M3C6 531 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 FAM102BQ5T8I3 360 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMTC3Q6ZXV5 915 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 SLC24A5Q71RS6 500 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 SGMS1Q86VZ5 419 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 FBXL6Q8N531 539 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 TTC16Q8NEE8 873 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 VN1R2Q8NFZ6 395 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 HELQQ8TDG4 1101 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 ASIC4Q96FT7 647 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 SDF4Q9BRK5 362 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 S1PR5Q9H228 398 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 CWH43Q9H720 699 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 AGO4Q9HCK5 861 aaKnown RBP9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 RIC8AQ9NPQ8 531 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 TLR9Q9NR96 1032 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 SEPT3Q9UH03 358 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 ST3GAL5Q9UNP4 418 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 LZTS1Q9Y250 596 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 PCDHGC5Q9Y5F6 944 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 SPTBN4Q9H254 2564 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 FAM186AA6NE01 2351 aa9.79□□□□□ -0.84
COL4A3BP-206ENST00000508809 COL1A2P08123 1366 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 ZBTB42B2RXF5 422 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 PER2O15055 1255 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 GPR182O15218 404 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 LILRB5O75023 590 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 RPS6KA5O75582 802 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 FGF18O76093 207 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 CCNE2O96020 404 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 HOXB4P17483 251 aaPredicted RBP9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 PLCB3Q01970 1234 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 DSC3Q14574 896 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 ZNF484Q5JVG2 852 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 ODR4Q5SWX8 454 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 DHX32Q7L7V1 743 aaKnown RBP9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 NIPA1Q7RTP0 329 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 MICAL1Q8TDZ2 1067 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMEM40Q8WWA1 233 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 RPGRIP1Q96KN7 1286 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 ADAM2Q99965 735 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 LSG1Q9H089 658 aaKnown RBP9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 TYW1Q9NV66 732 aaKnown RBP9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 SLC12A7Q9Y666 1083 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 DCHS1Q96JQ0 3298 aa9.78□□□□□ -0.84
COL4A3BP-206ENST00000508809 DENND3A2RUS2 1198 aa9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 TBKBP1A7MCY6 615 aa9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 SLC27A2O14975 620 aa9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 GPR32O75388 356 aa9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 ALBP02768 609 aa9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 PSAPP07602 524 aa9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 PCSK2P16519 638 aa9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 TARSP26639 723 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-206ENST00000508809 AVPR2P30518 371 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms