RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 MYBPC2Q14324 1141 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 AMHR2Q16671 573 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 KYAT1Q16773 422 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 HSP90AA4PQ58FG1 418 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 EEF1DP3Q658K8 133 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 FOXR2Q6PJQ5 311 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 FAM186BQ8IYM0 893 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 THNSL1Q8IYQ7 743 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 GPD1LQ8N335 351 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 RDH13Q8NBN7 331 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 SAAL1Q96ER3 474 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 DUSP9Q99956 384 aaKnown RBP12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 CBWD1Q9BRT8 395 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 THAP9Q9H5L6 903 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 AGO3Q9H9G7 860 aaKnown RBP12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 ERVK-5Q9HDB9 667 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
BRCC3P1-201ENST00000508559 A0A0B4J269 797 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 A0A1B0GUA9 196 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 TRIM43BA6NCK2 446 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 ZNF233A6NK53 670 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 TTLL13PA6NNM8 815 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 EXTL3O43909 919 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 EDN1P05305 212 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 YARSP54577 528 aaKnown RBP12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 OSTNP61366 133 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 SPAG1Q07617 926 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 MCL1Q07820 350 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 IQCB1Q15051 598 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 NFIL3Q16649 462 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 SLC39A4Q6P5W5 647 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 USP37Q86T82 979 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 DHX40Q8IX18 779 aaKnown RBP12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 C12orf56Q8IXR9 622 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 RNF169Q8NCN4 708 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 APBB2Q92870 758 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 TRIM43Q96BQ3 446 aaPredicted RBP12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 ADAM2Q99965 735 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 LBHD1Q9BQE6 289 aaPredicted RBP12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 CCDC94Q9BW85 323 aaPredicted RBP12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 APOL6Q9BWW8 343 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 FTHL17Q9BXU8 183 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 CDT1Q9H211 546 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 FANCLQ9NW38 375 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 NR2E3Q9Y5X4 410 aa12.02□□□□□ -0.49
BRCC3P1-201ENST00000508559 KCNJ18B7U540 433 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 SLC16A3O15427 465 aaKnown RBP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 ABCB7O75027 752 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 SERPINC1P01008 464 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 CLTAP09496 248 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 SKIP12755 728 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 ADSSP30520 456 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 HOXA11P31270 313 aaPredicted RBP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 ACOT2P49753 483 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 RAB27AP51159 221 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 PPIGQ13427 754 aaKnown RBP eCLIP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 KCNJ12Q14500 433 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 MBTPS1Q14703 1052 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 TCERG1LQ5VWI1 586 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 MFSD5Q6N075 450 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 GAS2L3Q86XJ1 694 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 DBF4BQ8NFT6 615 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 CNOT6LQ96LI5 555 aaKnown RBP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 FNBP1Q96RU3 617 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 WNT8AQ9H1J5 351 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 RBSNQ9H1K0 784 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 RPF1Q9H9Y2 349 aaKnown RBP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 METTL14Q9HCE5 456 aaKnown RBP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 SAMSN1Q9NSI8 373 aaKnown RBP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 PARP2Q9UGN5 583 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 ARMCX3Q9UH62 379 aaPredicted RBP12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 STYXL1Q9Y6J8 313 aa12.01□□□□□ -0.49
BRCC3P1-201ENST00000508559 NBNO60934 754 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 STAG3L1P0CL83 205 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 ACTN1P12814 892 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
BRCC3P1-201ENST00000508559 PROZP22891 400 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 CASP4P49662 377 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 IKBKEQ14164 716 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
BRCC3P1-201ENST00000508559 FILIP1LQ4L180 1135 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 SEZ6Q53EL9 994 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 PLEKHG4Q58EX7 1191 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 CNKSR3Q6P9H4 555 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 FAM43BQ6ZT52 329 aaPredicted RBP12□□□□□ -0.49
BRCC3P1-201ENST00000508559 PGBD4Q96DM1 585 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 ACAP3Q96P50 834 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 MED15Q96RN5 788 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 MKNK1Q9BUB5 465 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 EIF2AQ9BY44 585 aaKnown RBP12□□□□□ -0.49
BRCC3P1-201ENST00000508559 OSBPL7Q9BZF2 842 aa12□□□□□ -0.49
BRCC3P1-201ENST00000508559 PTPRHQ9HD43 1115 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms