RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ZNF623O75123 536 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 PRPF6O94906 941 aaKnown RBP9.46□□□□□ -0.9
USP46-207ENST00000508499 LDHAP00338 332 aaKnown RBP9.46□□□□□ -0.9
USP46-207ENST00000508499 EDN1P05305 212 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 ADRB2P07550 413 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 PBX2P40425 430 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 KCNA1Q09470 495 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 TMEM62Q0P6H9 643 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 PAK1Q13153 545 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 DCAF4L1Q3SXM0 396 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 ATF7IP2Q5U623 682 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 SLC27A1Q6PCB7 646 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 MPZL3Q6UWV2 235 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 SMYD4Q8IYR2 804 aaPredicted RBP9.46□□□□□ -0.9
USP46-207ENST00000508499 TMEM199Q8N511 208 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 ENOX1Q8TC92 643 aaKnown RBP9.46□□□□□ -0.9
USP46-207ENST00000508499 P2RX5Q93086 422 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 VWCEQ96DN2 955 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 SCLT1Q96NL6 688 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 TSPAN18Q96SJ8 248 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 IFIH1Q9BYX4 1025 aaKnown RBP9.46□□□□□ -0.9
USP46-207ENST00000508499 SEMA6BQ9H3T3 888 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 AGO3Q9H9G7 860 aaKnown RBP9.46□□□□□ -0.9
USP46-207ENST00000508499 KIAA1586Q9HCI6 787 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 AGPAT3Q9NRZ7 376 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 TBC1D7Q9P0N9 293 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 ST3GAL5Q9UNP4 418 aa9.46□□□□□ -0.9
USP46-207ENST00000508499 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
USP46-207ENST00000508499 UMODL1Q5DID0 1318 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 COL4A6Q14031 1691 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 TDRD15B5MCY1 1934 aaKnown RBP9.45□□□□□ -0.9
USP46-207ENST00000508499 CLDN3O15551 220 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 EVI5O60447 810 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 BAIAP3O94812 1187 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 CTSHP09668 335 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 MCF2P10911 925 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 SKIP12755 728 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 RAG1P15918 1043 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 RPL13P26373 211 aaKnown RBP9.45□□□□□ -0.9
USP46-207ENST00000508499 ADSSP30520 456 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 LIG4P49917 911 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 RAB27AP51159 221 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 MARSP56192 900 aaKnown RBP9.45□□□□□ -0.9
USP46-207ENST00000508499 FKBP3Q00688 224 aaKnown RBP9.45□□□□□ -0.9
USP46-207ENST00000508499 PAK2Q13177 524 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 CATSPER4Q7RTX7 472 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 RPUSD2Q8IZ73 545 aaKnown RBP9.45□□□□□ -0.9
USP46-207ENST00000508499 CRIPAKQ8N1N5 446 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 MED15Q96RN5 788 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 ADPGKQ9BRR6 497 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 TMX1Q9H3N1 280 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 PDZD7Q9H5P4 517 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 ELAC1Q9H777 363 aaKnown RBP9.45□□□□□ -0.9
USP46-207ENST00000508499 RGS18Q9NS28 235 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 C1orf112Q9NSG2 853 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
USP46-207ENST00000508499 A0A0U1RQF3 1178 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 ABHD14A-ACY1A0A1B0GW23 586 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 INPPL1O15357 1258 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 SLC16A3O15427 465 aaKnown RBP9.44□□□□□ -0.9
USP46-207ENST00000508499 FGFR1OPO95684 399 aaKnown RBP9.44□□□□□ -0.9
USP46-207ENST00000508499 GHRP10912 638 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 ITGB8P26012 769 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 CD52P31358 61 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 CYP2C18P33260 490 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 FAM189BP81408 668 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 NOLC1Q14978 699 aaKnown RBP eCLIP9.44□□□□□ -0.9
USP46-207ENST00000508499 ANO6Q4KMQ2 910 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 ARSIQ5FYB1 569 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 ANKRD40Q6AI12 368 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 CNKSR3Q6P9H4 555 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 LRRC55Q6ZSA7 311 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 MRPL10Q7Z7H8 261 aaKnown RBP9.44□□□□□ -0.9
USP46-207ENST00000508499 SYCP3Q8IZU3 236 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 NOC3LQ8WTT2 800 aaKnown RBP9.44□□□□□ -0.9
USP46-207ENST00000508499 NELFBQ8WX92 580 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 SEPT8Q92599 483 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 TSG101Q99816 390 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 TARS2Q9BW92 718 aaKnown RBP9.44□□□□□ -0.9
USP46-207ENST00000508499 GINS2Q9Y248 185 aa9.44□□□□□ -0.9
USP46-207ENST00000508499 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.44□□□□□ -0.9
USP46-207ENST00000508499 C9IYK1 514 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 ANKRD63C9JTQ0 380 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 OGTO15294 1046 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 B4GALT5O43286 388 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 CSDE1O75534 798 aaKnown RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 GNA14O95837 355 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 EOMESO95936 686 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 NR3C1P04150 777 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 GRM5P41594 1212 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 ZNF165P49910 485 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 PMS1P54277 932 aaKnown RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 CLDN10P78369 228 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 MYL5Q02045 173 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.9
USP46-207ENST00000508499 IQCB1Q15051 598 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 XKR4Q5GH76 650 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 UBXN11Q5T124 520 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms