RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 RPS6KC1Q96S38 1066 aa12.8□□□□□ -0.36
HMGCS1-204ENST00000507293 TUFT1Q9NNX1 390 aa12.8□□□□□ -0.36
HMGCS1-204ENST00000507293 MAN1C1Q9NR34 630 aa12.8□□□□□ -0.36
HMGCS1-204ENST00000507293 LIMD1Q9UGP4 676 aa12.8□□□□□ -0.36
HMGCS1-204ENST00000507293 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
HMGCS1-204ENST00000507293 SSX2IPQ9Y2D8 614 aa12.8□□□□□ -0.36
HMGCS1-204ENST00000507293 PIEZO1Q92508 2521 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 TEX28O15482 410 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 EIF5BO60841 1220 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 EFEMP2O95967 443 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 ADH1AP07327 375 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 KIAA0319Q5VV43 1072 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 CATSPER3Q86XQ3 398 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 GSTCDQ8NEC7 633 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 MCPH1Q8NEM0 835 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 C8orf76Q96K31 380 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 KLK14Q9P0G3 267 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 PARP2Q9UGN5 583 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 ZMYM2Q9UBW7 1377 aa12.79□□□□□ -0.36
HMGCS1-204ENST00000507293 TRIOO75962 3097 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 TRIP11Q15643 1979 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 DOCK8Q8NF50 2099 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 NR1I2O75469 434 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 GLUD1P00367 558 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 MYBP10242 640 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 DSG1Q02413 1049 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 GRIK3Q13003 919 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 ZNF174Q15697 407 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 CDCA2Q69YH5 1023 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 C15orf39Q6ZRI6 1047 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 OTOP3Q7RTS5 596 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 ZBTB8OSQ8IWT0 167 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 ACSF2Q96CM8 615 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 B3GALT6Q96L58 329 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 POLR3CQ9BUI4 534 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 RXFP1Q9HBX9 757 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 PRMT7Q9NVM4 692 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 CACNG4Q9UBN1 327 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
HMGCS1-204ENST00000507293 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 TTC38Q5R3I4 469 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 PADI6Q6TGC4 694 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 CMASQ8NFW8 434 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 ERMNQ8TAM6 284 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 GPR62Q9BZJ7 368 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 FOXP1Q9H334 677 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 FZD8Q9H461 694 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 FAM86C1Q9NVL1 165 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 ADAM28Q9UKQ2 775 aa12.77□□□□□ -0.37
HMGCS1-204ENST00000507293 CCDC195A0A1B0GUA6 201 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 N4BP3O15049 544 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 PRKCBP05771 671 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 SPATA31D3P0C874 917 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 LIG1P18858 919 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 CYP11B2P19099 503 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 RPA1P27694 616 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 FAM187BQ17R55 369 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 SPATA31D4Q6ZUB0 917 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 TMEM105Q8N8V8 129 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 RIN2Q8WYP3 895 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 PAAF1Q9BRP4 392 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 LLPHQ9BRT6 129 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 PDZD7Q9H5P4 517 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 CHST7Q9NS84 486 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 DPP7Q9UHL4 492 aa12.76□□□□□ -0.37
HMGCS1-204ENST00000507293 CASTOR2A6NHX0 329 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 CLUHO75153 1309 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 RFPL2O75678 378 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 EDN1P05305 212 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 RPL17P18621 184 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 NAMPTP43490 491 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 TUSC3Q13454 348 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 TDGQ13569 410 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 GNL2Q13823 731 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 NBR1Q14596 966 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 MAPK6Q16659 721 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 USP41Q3LFD5 358 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 HAUS3Q68CZ6 603 aa12.75□□□□□ -0.37
HMGCS1-204ENST00000507293 FAM184AQ8NB25 1140 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms