RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 EBF2Q9HAK2 575 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 DLATP10515 647 aaKnown RBP12.77□□□□□ -0.37
UBE3D-206ENST00000505226 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
UBE3D-206ENST00000505226 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 SEPT14Q6ZU15 432 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
UBE3D-206ENST00000505226 CYP4X1Q8N118 509 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 KREMEN1Q96MU8 473 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 CLDN3O15551 220 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 CYP26A1O43174 497 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 HIP1RO75146 1068 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 RTN2O75298 545 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 CALCAP01258 141 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 ARP10275 920 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 CETPP11597 493 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 MYO1EQ12965 1108 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 SNX1Q13596 522 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 SLMAPQ14BN4 828 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 CGB2Q6NT52 195 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 ANKLE1Q8NAG6 615 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 SLC5A5Q92911 643 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 ARHGEF2Q92974 986 aaKnown RBP12.76□□□□□ -0.37
UBE3D-206ENST00000505226 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
UBE3D-206ENST00000505226 UNC45AQ9H3U1 944 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 USP15Q9Y4E8 981 aaPredicted RBP12.76□□□□□ -0.37
UBE3D-206ENST00000505226 CEP83Q9Y592 693 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 BCRP11274 1271 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 NQO1P15559 274 aaKnown RBP12.76□□□□□ -0.37
UBE3D-206ENST00000505226 HSPA6P17066 643 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 IVDP26440 423 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 CRKP46108 304 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 MGAT5Q09328 741 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 RIPK1Q13546 671 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 SEL1L2Q5TEA6 688 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 RHBDF2Q6PJF5 856 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 SLC9A9Q8IVB4 645 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 SYCP3Q8IZU3 236 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 FITM2Q8N6M3 262 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 NSMCE1Q8WV22 266 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 PSPC1Q8WXF1 523 aaKnown RBP12.76□□□□□ -0.37
UBE3D-206ENST00000505226 ATG4AQ8WYN0 398 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 L3MBTL3Q96JM7 780 aaPredicted RBP12.76□□□□□ -0.37
UBE3D-206ENST00000505226 NUP85Q9BW27 656 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 ECT2Q9H8V3 914 aa12.76□□□□□ -0.37
UBE3D-206ENST00000505226 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 ANP32DO95626 131 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 CFBP00751 764 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 KRT16P08779 473 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 PDE6CP51160 858 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 FMO1Q01740 532 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 TNIP1Q15025 636 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 TATDN1Q6P1N9 297 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 GDAP1Q8TB36 358 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 RMDN2Q96LZ7 410 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 WNT8AQ9H1J5 351 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 PARP2Q9UGN5 583 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 PIK3CDO00329 1044 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 HGSO14964 777 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 MTA2O94776 668 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 VAMP7P51809 220 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 PRELPP51888 382 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 BNIP1Q12981 228 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 TRIP13Q15645 432 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 CLUL1Q15846 466 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 NUGGCQ68CJ6 796 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 CRELD2Q6UXH1 353 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 RNF207Q6ZRF8 634 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 CYFIP1Q7L576 1253 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 ANKRD42Q8N9B4 389 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 ZNF564Q8TBZ8 553 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 GMCL1Q96IK5 515 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 SH2D3AQ9BRG2 576 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 SEL1LQ9UBV2 794 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 GGPS1O95749 300 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 ALADP13716 330 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 PAX7P23759 505 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 KYNUQ16719 465 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 GMCL1P1Q8NEA9 526 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 LRRC19Q9H756 370 aa12.75□□□□□ -0.37
UBE3D-206ENST00000505226 ZNFX1Q9P2E3 1918 aaKnown RBP12.75□□□□□ -0.37
UBE3D-206ENST00000505226 SPOPO43791 374 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 BMP3P12645 472 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 CLNS1AP54105 237 aaKnown RBP12.74□□□□□ -0.37
UBE3D-206ENST00000505226 KRT17Q04695 432 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 TAOK1Q7L7X3 1001 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms