RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 CMTR2Q8IYT2 770 aaKnown RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 GOLGA5Q8TBA6 731 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 HPS3Q969F9 1004 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 UBN1Q9NPG3 1134 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 RNF216Q9NWF9 866 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 GDAQ9Y2T3 454 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 GIT1Q9Y2X7 761 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 KIAA0100Q14667 2235 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 SFI1A8K8P3 1242 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 H0YGN5 161 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 RPS6KA5O75582 802 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 MYCP01106 439 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 ASIC1P78348 528 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 GPR65Q8IYL9 337 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 MYCT1Q8N699 235 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 METTL13Q8N6R0 699 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 STAMQ92783 540 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 SMARCE1Q969G3 411 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 FAXDC2Q96IV6 333 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 EIF2AQ9BY44 585 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 BMP2KQ9NSY1 1161 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 FAM105AQ9NUU6 356 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 TBCAO75347 108 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 POU3F3P20264 500 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 SMAD3P84022 425 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 SLFN12LQ6IEE8 588 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 DBF4BQ8NFT6 615 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 PANK2Q9BZ23 570 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 IPPQ9Y573 584 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 ANO9A1A5B4 782 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 OFD1O75665 1012 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 CCNE1P24864 410 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 AFMP43652 599 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 WNT7BP56706 349 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 PRPF4BQ13523 1007 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 COL19A1Q14993 1142 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 IQCB1Q15051 598 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 FAM47CQ5HY64 1035 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 PLEKHO2Q8TD55 490 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 NLRP7Q8WX94 980 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 FAM49AQ9H0Q0 323 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 VRTNQ9H8Y1 702 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 SUGCTQ9HAC7 445 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 LRRC10BA6NIK2 292 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 GOLGA6L22H0YM25 854 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 K7ENM7 598 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 PTGESO14684 152 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 EXTL3O43909 919 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 C1RP00736 705 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 LRPAP1P30533 357 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 FAM109BQ6ICB4 259 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 CD302Q8IX05 232 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 MYOCDQ8IZQ8 938 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 DEPTORQ8TB45 409 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 EXOC1Q9NV70 894 aa9.08□□□□□ -0.96
CDC42SE2-208ENST00000505065 NUP210Q8TEM1 1887 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 K7ERI5 159 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 M0QZ92 97 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 IKBKBO14920 756 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 GHRP10912 638 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 HERC4Q5GLZ8 1057 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 BRSK2Q8IWQ3 736 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 IKZF4Q9H2S9 585 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 MRPL44Q9H9J2 332 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 EXOC7Q9UPT5 735 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 OGTO15294 1046 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 NOLC1Q14978 699 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 PSMD6Q15008 389 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 ENOX2Q16206 610 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.07□□□□□ -0.964e-6■□□□□ 8.6
CDC42SE2-208ENST00000505065 DHX40Q8IX18 779 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 TMC2Q8TDI7 906 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 NLRP4Q96MN2 994 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 KIAA1586Q9HCI6 787 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 SLC10A6Q3KNW5 377 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 ENOX1Q8TC92 643 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 P2RX5Q93086 422 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 CXCL16Q9H2A7 254 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 COQ4Q9Y3A0 265 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 PCDHB2Q9Y5E7 798 aa9.07□□□□□ -0.96
CDC42SE2-208ENST00000505065 SRGAP2CP0DJJ0 459 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 RAG1P15918 1043 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 PAX3P23760 479 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 TMEM62Q0P6H9 643 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 DPCR1Q3MIW9 517 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZSCAN23Q3MJ62 389 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 ANKRD40Q6AI12 368 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 STXBP4Q6ZWJ1 553 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 FILIP1Q7Z7B0 1213 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZSWIM2Q8NEG5 633 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 TMEM175Q9BSA9 504 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 C2CD2Q9Y426 696 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 NR2E3Q9Y5X4 410 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 CHD7Q9P2D1 2997 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 C2orf16Q68DN1 1984 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 LRRIQ4A6NIV6 560 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 FSCN2O14926 492 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms