RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 A0A1W2PQ45 241 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 A0A1W2PQY0 241 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 INO80B-WBP1J3KQ70 363 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 EXTL3O43909 919 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 ZEB2O60315 1214 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 TOM1L1O75674 476 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 AFPP02771 609 aaKnown RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 DARSP14868 501 aaKnown RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 ARF4P18085 180 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 FGFR4P22455 802 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 TMOD1P28289 359 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 HOXA11P31270 313 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 TNFSF9P41273 254 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 CLDN10P78369 228 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 APBA1Q02410 837 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 PPP2R3AQ06190 1150 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 RBL2Q08999 1139 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 STRN3Q13033 797 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 MAPK6Q16659 721 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 FILIP1LQ4L180 1135 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 FIGNQ5HY92 759 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 E4F1Q66K89 784 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 C15orf39Q6ZRI6 1047 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 SRGAP1Q7Z6B7 1085 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 CDR2LQ86X02 465 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 CEP120Q8N960 986 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 LMO3Q8TAP4 145 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 POMGNT1Q8WZA1 660 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 OSMRQ99650 979 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 INO80BQ9C086 356 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.6
TPM3-217ENST00000504663 OGDHLQ9ULD0 1010 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 TNFSF13BQ9Y275 285 aa11.33□□□□□ -0.6
TPM3-217ENST00000504663 KIAA0391O15091 583 aaKnown RBP11.32□□□□□ -0.6
TPM3-217ENST00000504663 PMM2O15305 246 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 MFAP3LO75121 409 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 LRRN2O75325 713 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 CABYRO75952 493 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 TPM3P06753 285 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 CCL5P13501 91 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 FMO5P49326 533 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 CHMP4BP1P59074 171 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
TPM3-217ENST00000504663 ITGA7Q13683 1181 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 NOLC1Q14978 699 aaKnown RBP eCLIP11.32□□□□□ -0.6
TPM3-217ENST00000504663 PSMD6Q15008 389 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 SNX17Q15036 470 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 EPC2Q52LR7 807 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 ATF7IP2Q5U623 682 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 SCARA3Q6AZY7 606 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 MPZL3Q6UWV2 235 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 INTS8Q75QN2 995 aaKnown RBP11.32□□□□□ -0.6
TPM3-217ENST00000504663 RNF180Q86T96 592 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 CREBRFQ8IUR6 639 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 BRSK2Q8IWQ3 736 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 LRRC8AQ8IWT6 810 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 TMEM192Q8IY95 271 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 RDH13Q8NBN7 331 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 BAP1Q92560 729 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 BICD1Q96G01 975 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 CPB2Q96IY4 423 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 ZNF333Q96JL9 665 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 BEGAINQ9BUH8 593 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
TPM3-217ENST00000504663 TRMT13Q9NUP7 481 aaKnown RBP11.32□□□□□ -0.6
TPM3-217ENST00000504663 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
TPM3-217ENST00000504663 AGO2Q9UKV8 859 aaKnown RBP11.32□□□□□ -0.6
TPM3-217ENST00000504663 PYCARDQ9ULZ3 195 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 FRMD4BQ9Y2L6 1034 aa11.32□□□□□ -0.6
TPM3-217ENST00000504663 CITO14578 2027 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 TRIP11Q15643 1979 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 A0A1B0GUA9 196 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 A0A1W2PQJ5 194 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 GTPBP10A4D1E9 387 aaKnown RBP11.31□□□□□ -0.6
TPM3-217ENST00000504663 CHRNA1P02708 482 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 SLC9A1P19634 815 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 PON1P27169 355 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 CASP14P31944 242 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 ACOT2P49753 483 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 CDK7P50613 346 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 VAMP7P51809 220 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 ADKP55263 362 aaKnown RBP11.31□□□□□ -0.6
TPM3-217ENST00000504663 MRPS6P82932 125 aaKnown RBP11.31□□□□□ -0.6
TPM3-217ENST00000504663 PRPF4BQ13523 1007 aaKnown RBP11.31□□□□□ -0.6
TPM3-217ENST00000504663 DCAF17Q5H9S7 520 aaPredicted RBP11.31□□□□□ -0.6
TPM3-217ENST00000504663 UBXN11Q5T124 520 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 SLFN12LQ6IEE8 588 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms