RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 HNRNPA1P09651 372 aaKnown RBP eCLIP14.14□□□□□ -0.15
LSM6-204ENST00000504181 CHRNB1P11230 501 aa14.14□□□□□ -0.15
LSM6-204ENST00000504181 PLA2G2CQ5R387 149 aa14.14□□□□□ -0.15
LSM6-204ENST00000504181 TANGO2Q6ICL3 276 aa14.14□□□□□ -0.15
LSM6-204ENST00000504181 COLGALT2Q8IYK4 626 aa14.14□□□□□ -0.15
LSM6-204ENST00000504181 SPEM1Q8N4L4 309 aa14.14□□□□□ -0.15
LSM6-204ENST00000504181 BBC3Q96PG8 261 aaPredicted RBP14.14□□□□□ -0.15
LSM6-204ENST00000504181 FDXACB1Q9BRP7 624 aaPredicted RBP14.14□□□□□ -0.15
LSM6-204ENST00000504181 GABBR1Q9UBS5 961 aa14.14□□□□□ -0.15
LSM6-204ENST00000504181 ERICH2A1L162 156 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 EIF4E1BA6NMX2 242 aaKnown RBP14.13□□□□□ -0.15
LSM6-204ENST00000504181 C4orf47A7E2U8 309 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 XYLBO75191 536 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 MPLP40238 635 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 RAP1GAPP47736 663 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 DRP2Q13474 957 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 PABPC1LQ4VXU2 614 aaKnown RBP14.13□□□□□ -0.15
LSM6-204ENST00000504181 C20orf194Q5TEA3 1177 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 PRSS55Q6UWB4 352 aaPredicted RBP14.13□□□□□ -0.15
LSM6-204ENST00000504181 CATSPER4Q7RTX7 472 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 KBTBD6Q86V97 674 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 WDR5BQ86VZ2 330 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 RILPL2Q969X0 211 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 LOXL4Q96JB6 756 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 GPR62Q9BZJ7 368 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 RBM12Q9NTZ6 932 aaKnown RBP14.13□□□□□ -0.15
LSM6-204ENST00000504181 C2orf42Q9NWW7 574 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 GPSM3Q9Y4H4 160 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 PIAS3Q9Y6X2 628 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 ADAMTS9Q9P2N4 1935 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 CNTNAP2Q9UHC6 1331 aa14.13□□□□□ -0.15
LSM6-204ENST00000504181 hCG_1642624A0A1W2PR95 340 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 MEIS1O00470 390 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 DHX15O43143 795 aaKnown RBP14.12□□□□□ -0.15
LSM6-204ENST00000504181 HYAL3O43820 417 aaPredicted RBP14.12□□□□□ -0.15
LSM6-204ENST00000504181 PTGDRQ13258 359 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 COL28A1Q2UY09 1125 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 USP41Q3LFD5 358 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 FUT10Q6P4F1 479 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 CATIPQ7Z7H3 387 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 ELSPBP1Q96BH3 223 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 FAM167AQ96KS9 214 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 DNMT3BQ9UBC3 853 aaKnown RBP14.12□□□□□ -0.15
LSM6-204ENST00000504181 MRPS23Q9Y3D9 190 aaKnown RBP14.12□□□□□ -0.15
LSM6-204ENST00000504181 NEUROG3Q9Y4Z2 214 aa14.12□□□□□ -0.15
LSM6-204ENST00000504181 PAPSS2O95340 614 aaPredicted RBP14.11□□□□□ -0.15
LSM6-204ENST00000504181 PLEKHA8P1O95397 391 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 PSAPP07602 524 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 CCNE1P24864 410 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 ZNF76P36508 570 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 PDE1AP54750 535 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 CREMQ03060 361 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 DAB2IPQ5VWQ8 1189 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
LSM6-204ENST00000504181 Q6ZS52 159 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 MRPL10Q7Z7H8 261 aaKnown RBP14.11□□□□□ -0.15
LSM6-204ENST00000504181 CMTR1Q8N1G2 835 aaKnown RBP14.11□□□□□ -0.15
LSM6-204ENST00000504181 SLC7A14Q8TBB6 771 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 ADAM32Q8TC27 787 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 VPS45Q9NRW7 570 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 TCEAL9Q9UHQ7 104 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 KLK13Q9UKR3 277 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 MYO16Q9Y6X6 1858 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 TRIP11Q15643 1979 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 ARID2Q68CP9 1835 aa14.11□□□□□ -0.15
LSM6-204ENST00000504181 PLXNB3Q9ULL4 1909 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 RPP40O75818 363 aaKnown RBP14.1□□□□□ -0.15
LSM6-204ENST00000504181 OATP04181 439 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 CEACAM1P13688 526 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 SDSP20132 328 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 FCARP24071 287 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 HOXA9P31269 272 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 PROSER1Q86XN7 944 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 PLA2G4DQ86XP0 818 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 SRBD1Q8N5C6 995 aaKnown RBP14.1□□□□□ -0.15
LSM6-204ENST00000504181 CTCFLQ8NI51 663 aaPredicted RBP14.1□□□□□ -0.15
LSM6-204ENST00000504181 GAB3Q8WWW8 586 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 DSCC1Q9BVC3 393 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 TRMT61BQ9BVS5 477 aaKnown RBP14.1□□□□□ -0.15
LSM6-204ENST00000504181 ANO3Q9BYT9 981 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 INO80BQ9C086 356 aaPredicted RBP14.1□□□□□ -0.15
LSM6-204ENST00000504181 ZNF334Q9HCZ1 680 aaPredicted RBP14.1□□□□□ -0.15
LSM6-204ENST00000504181 KCNH3Q9ULD8 1083 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 SAMM50Q9Y512 469 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 PCDHGA5Q9Y5G8 931 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 CELSR3Q9NYQ7 3312 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 KALRNO60229 2985 aa14.1□□□□□ -0.15
LSM6-204ENST00000504181 PI4KAP42356 2102 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 ABCA7Q8IZY2 2146 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 KIAA1549LQ6ZVL6 1849 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 IPO5O00410 1097 aaKnown RBP14.09□□□□□ -0.15
LSM6-204ENST00000504181 ZNF862O60290 1169 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 NR1I2O75469 434 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 SEC24BO95487 1268 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 CCDC192P0DO97 292 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 CEBPBP17676 345 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 GDI1P31150 447 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 PXNP49023 591 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms