RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 E2F8A0AVK6 867 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 VSTM5A8MXK1 200 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 ARHGEF15O94989 841 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 FDPSP14324 419 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 MSR1P21757 451 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TBX2Q13207 712 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 ATP1A4Q13733 1029 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 R3HDM1Q15032 1099 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TTMPQ5BVD1 217 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TMEM214Q6NUQ4 689 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TTLL7Q6ZT98 887 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 EEPD1Q7L9B9 569 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 SYTL1Q8IYJ3 562 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 ARHGAP24Q8N264 748 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 PIK3C3Q8NEB9 887 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LRRC20Q8TCA0 184 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 UPF3BQ9BZI7 483 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 RYDENQ9NUL5 291 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 BCORL1Q5H9F3 1711 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 WDR7Q9Y4E6 1490 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 DISP1Q96F81 1524 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 PFDN6O15212 129 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 BUB1O43683 1085 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 RENBPP51606 427 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TP53BP2Q13625 1128 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 BMPR2Q13873 1038 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 CRY1Q16526 586 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TMTC3Q6ZXV5 915 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LILRB2Q8N423 598 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 RFKQ969G6 155 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 SSX3Q99909 188 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 COPS4Q9BT78 406 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 KCND1Q9NSA2 647 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TYW1Q9NV66 732 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LAMP5Q9UJQ1 280 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 PCDHGB7Q9Y5F8 929 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 STX16-NPEPL1H3BU86 382 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 M0QZ92 97 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 ATP2A1O14983 1001 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 KERAO60938 352 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 DBTP11182 482 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LCP1P13796 627 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 IDO1P14902 403 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 PIK3CBP42338 1070 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 YWHAEP62258 255 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 IRX4P78413 519 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LRRC36Q1X8D7 754 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TBRG1Q3YBR2 411 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 FUT11Q495W5 492 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 BEND4Q6ZU67 534 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 GALNTL5Q7Z4T8 443 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 ZSCAN29Q8IWY8 852 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LPIN3Q9BQK8 851 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 KLHL4Q9C0H6 718 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TMEM60Q9H2L4 133 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 IFT22Q9H7X7 185 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LY9Q9HBG7 655 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 LUZP4Q9P127 313 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 DDX20Q9UHI6 824 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 VWA3AA6NCI4 1184 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 K7ENM7 598 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 FPGTO14772 594 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 TRIM3O75382 744 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 MTHFRP42898 656 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 PPP2R5DQ14738 602 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 CAMK4Q16566 473 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 ELMOD2Q8IZ81 293 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 USP13Q92995 863 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 CIDECQ96AQ7 238 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 PPP1R13BQ96KQ4 1090 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 TBCDQ9BTW9 1192 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 EHD3Q9NZN3 535 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 STOML1Q9UBI4 398 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 DDX25Q9UHL0 483 aaKnown RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF225Q9UK10 706 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 DNM3Q9UQ16 869 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 WDR33Q9C0J8 1336 aaKnown RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 ZSCAN5CA6NGD5 496 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 F8W8V4 182 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 BMP10O95393 424 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 MYL4P12829 197 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 HOXA10P31260 410 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 AFF1P51825 1210 aaKnown RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 BPIFB3P59826 476 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 SF3A3Q12874 501 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 ETFRF1Q6IPR1 90 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 DNAJC9Q8WXX5 260 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 ZC3H10Q96K80 434 aaKnown RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 ZSCAN5AQ9BUG6 496 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 CALN1Q9BXU9 219 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 OXCT2Q9BYC2 517 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-204ENST00000504131 MLXQ9UH92 298 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 TRPS1Q9UHF7 1281 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 COMMD3-BMI1R4GMX3 469 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 H3BRB1 525 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 KRIT1O00522 736 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 DNAJB6O75190 326 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 ULK1O75385 1050 aa6.6□□□□□ -1.35
CLCN3-204ENST00000504131 OXSR1O95747 527 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms