RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 H2AFZP0C0S5 128 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 ZBTB48P10074 688 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 TCP1P17987 556 aaKnown RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 ARHGAP1Q07960 439 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 PSMD6Q15008 389 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 CRELD2Q6UXH1 353 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 H2AFVQ71UI9 128 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 ZNF467Q7Z7K2 595 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 GLYCTKQ8IVS8 523 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 C2orf69Q8N8R5 385 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 TAS1R2Q8TE23 839 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 TCP11Q8WWU5 503 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 KAT5Q92993 513 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 CAPZA3Q96KX2 299 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 KREMEN1Q96MU8 473 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 TARS2Q9BW92 718 aaKnown RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 ZNF446Q9NWS9 450 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 TSKSQ9UJT2 592 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 A0A0A6YYK5 440 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 RBM47A0AV96 593 aaKnown RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 GRID2IPA4D2P6 1211 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 PDE2AO00408 941 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 DLATP10515 647 aaKnown RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 NLRP11P59045 1033 aaKnown RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 CDCA2Q69YH5 1023 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 DNAAF5Q86Y56 855 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 HELQQ8TDG4 1101 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 ZBTB45Q96K62 511 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 RRAGCQ9HB90 399 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 VTA1Q9NP79 307 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 RAB20Q9NX57 234 aa23.09■■□□□ 1.29
UBE2D3-216ENST00000503742 A0A0B4J269 797 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 NCK2O43639 380 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 CELF2O95319 508 aaKnown RBP23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 NFRKBQ6P4R8 1299 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 MAMDC4Q6UXC1 1216 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 ZNF572Q7Z3I7 529 aaPredicted RBP23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 FAM71AQ8IYT1 594 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 COG1Q8WTW3 980 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 ZNF516Q92618 1163 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 KATNBL1Q9H079 304 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 ZMYND15Q9H091 742 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 CCDC113Q9H0I3 377 aa23.08■■□□□ 1.29
UBE2D3-216ENST00000503742 ADGRA2Q96PE1 1338 aa23.08■■□□□ 1.28
UBE2D3-216ENST00000503742 EFNA5P52803 228 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 MXD4Q14582 209 aaPredicted RBP23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 SHC3Q92529 594 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 AGPAT1Q99943 283 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 PTPN18Q99952 460 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 RAB21Q9UL25 225 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 HBP1O60381 514 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 LDHAP00338 332 aaKnown RBP23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 TNFAIP3P21580 790 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 GALCP54803 685 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 MFAP3P55082 362 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 LAMTOR4Q0VGL1 99 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 PRPF4BQ13523 1007 aaKnown RBP23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 LAMC2Q13753 1193 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 MEI1Q5TIA1 1274 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 ZPBP2Q6X784 338 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 PPM1KQ8N3J5 372 aa23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
UBE2D3-216ENST00000503742 MSCO60682 206 aa23.06■■□□□ 1.28
UBE2D3-216ENST00000503742 ACOT2P49753 483 aa23.06■■□□□ 1.28
UBE2D3-216ENST00000503742 WNT7BP56706 349 aa23.06■■□□□ 1.28
UBE2D3-216ENST00000503742 IFI16Q16666 785 aaKnown RBP23.06■■□□□ 1.28
UBE2D3-216ENST00000503742 NT5C1BQ96P26 610 aa23.06■■□□□ 1.28
UBE2D3-216ENST00000503742 SUGCTQ9HAC7 445 aa23.06■■□□□ 1.28
UBE2D3-216ENST00000503742 IVNS1ABPQ9Y6Y0 642 aa23.06■■□□□ 1.28
UBE2D3-216ENST00000503742 GPR142Q7Z601 462 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 LRRC71Q8N4P6 559 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 LRRC57Q8N9N7 239 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 PARK7Q99497 189 aaKnown RBP23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 MSTO1Q9BUK6 570 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 NCANO14594 1321 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 ZC3H11AO75152 810 aaKnown RBP eCLIP23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 ZRANB2O95218 330 aaKnown RBP eCLIP23.05■■□□□ 1.281e-7■■□□□ 13.8
UBE2D3-216ENST00000503742 ITIH3Q06033 890 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 GRB14Q14449 540 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 ZACNQ401N2 412 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 PALB2Q86YC2 1186 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 TPCN2Q8NHX9 752 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 CAGE1Q8TC20 777 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 SLC20A1Q8WUM9 679 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 EMID1Q96A84 441 aaPredicted RBP23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 PNKPQ96T60 521 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 ERAP1Q9NZ08 941 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 TRPC6Q9Y210 931 aa23.05■■□□□ 1.28
UBE2D3-216ENST00000503742 SNAI1O95863 264 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 FTCDO95954 541 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 GH1P01241 217 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 C4BPAP04003 597 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 TMEM253P0C7T8 217 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 FAM110CQ1W6H9 321 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 ZBTB41Q5SVQ8 909 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 GJC2Q5T442 439 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 TRAPPC12Q8WVT3 735 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 FNBP1Q96RU3 617 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 PDE11AQ9HCR9 933 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms