RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 HASPINQ8TF76 798 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 ING5Q8WYH8 240 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 SECISBP2LQ93073 1101 aaKnown RBP10.2□□□□□ -0.78
CCDC171-209ENST00000498725 YTHDC1Q96MU7 727 aaKnown RBP10.2□□□□□ -0.78
CCDC171-209ENST00000498725 COLEC11Q9BWP8 271 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 SLC26A6Q9BXS9 759 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 GPR62Q9BZJ7 368 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 SLKQ9H2G2 1235 aaPredicted RBP10.2□□□□□ -0.78
CCDC171-209ENST00000498725 PLEKHA4Q9H4M7 779 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 KLK14Q9P0G3 267 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 IPPQ9Y573 584 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 SPTLC1O15269 473 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 NR1I2O75469 434 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 ZMYND10O75800 440 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 SDHBP21912 280 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 NLRP5P59047 1200 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 IRX6P78412 446 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-209ENST00000498725 LAMTOR4Q0VGL1 99 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 USP41Q3LFD5 358 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 PPM1LQ5SGD2 360 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 FUT10Q6P4F1 479 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 TPRG1Q6ZUI0 275 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 CDR2LQ86X02 465 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-209ENST00000498725 CEP57Q86XR8 500 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 RNF149Q8NC42 400 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 ITFG1Q8TB96 612 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 HDAC7Q8WUI4 952 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 PSPC1Q8WXF1 523 aaKnown RBP10.19□□□□□ -0.78
CCDC171-209ENST00000498725 SLC7A3Q8WY07 619 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 CEP170P1Q96L14 293 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 LTB4R2Q9NPC1 389 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 HCFC1R1Q9NWW0 138 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 ZDHHC7Q9NXF8 308 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 RALYQ9UKM9 306 aaKnown RBP10.19□□□□□ -0.78
CCDC171-209ENST00000498725 FBXO4Q9UKT5 387 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 CDH7Q9ULB5 785 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 OTOGLQ3ZCN5 2332 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 TICRRQ7Z2Z1 1910 aa10.19□□□□□ -0.78
CCDC171-209ENST00000498725 NOTCH4Q99466 2003 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 VWA8A3KMH1 1905 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 EML1O00423 815 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 PRPF3O43395 683 aaKnown RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 TADA2AO75478 443 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 AKAP5P24588 427 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 USP11P51784 963 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 PSMC5P62195 406 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 LMNB2Q03252 620 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 DSC1Q08554 894 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 SPEM2Q0P670 501 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 ZNF528Q3MIS6 628 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 ZBTB41Q5SVQ8 909 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 LIN9Q5TKA1 542 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 LILRA6Q6PI73 481 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 Q6ZUG5 572 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 SRGAP1Q7Z6B7 1085 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 RNF168Q8IYW5 571 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 CCDC148Q8NFR7 591 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 RDM1Q8NG50 284 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 FGF13Q92913 245 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 BRF1Q92994 677 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 JPH2Q9BR39 696 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 PHF20Q9BVI0 1012 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 RHOBTB2Q9BYZ6 727 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 TRIM6Q9C030 488 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 NXF3Q9H4D5 531 aaKnown RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 PARD6AQ9NPB6 346 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 UBN1Q9NPG3 1134 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 CHST7Q9NS84 486 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 ZSCAN32Q9NX65 697 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 PARP2Q9UGN5 583 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 ADAM28Q9UKQ2 775 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 NDRG2Q9UN36 371 aaKnown RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 PCDHGA2Q9Y5H1 932 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 NCOR2Q9Y618 2525 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 PDCD11Q14690 1871 aaKnown RBP10.18□□□□□ -0.78
CCDC171-209ENST00000498725 CEP250Q9BV73 2442 aa10.18□□□□□ -0.78
CCDC171-209ENST00000498725 CCDC196A0A1B0GTZ2 297 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 PRR5-ARHGAP8B1AHC4 643 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 INO80B-WBP1J3KQ70 363 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 TSPAN1O60635 241 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 NPTXRO95502 500 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 EFEMP2O95967 443 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 TARSP26639 723 aaKnown RBP10.17□□□□□ -0.78
CCDC171-209ENST00000498725 CCT2P78371 535 aaKnown RBP10.17□□□□□ -0.78
CCDC171-209ENST00000498725 ARHGAP8P85298 464 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 PRKCQQ04759 706 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 XKR9Q5GH70 373 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 PPM1JQ5JR12 505 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 MTSS1LQ765P7 747 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 GPR161Q8N6U8 529 aaKnown RBP10.17□□□□□ -0.78
CCDC171-209ENST00000498725 CNNM3Q8NE01 707 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 MCRS1Q96EZ8 462 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 PAAF1Q9BRP4 392 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 RTKNQ9BST9 563 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 NCOA5Q9HCD5 579 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms