RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CEP126Q9P2H0 1117 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 MYH4Q9Y623 1939 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 NOTCH4Q99466 2003 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 VWA8A3KMH1 1905 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 HELZP42694 1942 aaKnown RBP6.04□□□□□ -1.44
FXN-205ENST00000498653 EXTL3O43909 919 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 SMIM10L2AP0DMW4 78 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 SMIM10L2BP0DMW5 78 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 CTSAP10619 480 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 DCTP40126 519 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 SARSP49591 514 aaKnown RBP6.04□□□□□ -1.44
FXN-205ENST00000498653 ADAM17P78536 824 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 TFCP2Q12800 502 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 NNTQ13423 1086 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 ARHGAP40Q5TG30 622 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 PMS2CLQ68D20 193 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 NAA16Q6N069 864 aaPredicted RBP6.04□□□□□ -1.44
FXN-205ENST00000498653 MTSS1LQ765P7 747 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 CHST3Q7LGC8 479 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 TMEM173Q86WV6 379 aaPredicted RBP6.04□□□□□ -1.44
FXN-205ENST00000498653 CCDC116Q8IYX3 515 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 VPS52Q8N1B4 723 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 RHPN1Q8TCX5 695 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 FAM3CQ92520 227 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 DNASE1L2Q92874 299 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 CALR3Q96L12 384 aaKnown RBP6.04□□□□□ -1.44
FXN-205ENST00000498653 TRERF1Q96PN7 1200 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 TMX1Q9H3N1 280 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 CPNE5Q9HCH3 593 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 STARD5Q9NSY2 213 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 PGPEP1Q9NXJ5 209 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 CDH7Q9ULB5 785 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 LRFN2Q9ULH4 789 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 APOBEC2Q9Y235 224 aaKnown RBP6.04□□□□□ -1.44
FXN-205ENST00000498653 AKAP2Q9Y2D5 859 aa6.04□□□□□ -1.44
FXN-205ENST00000498653 ZFP37Q9Y6Q3 630 aaPredicted RBP6.04□□□□□ -1.44
FXN-205ENST00000498653 CCDC168Q8NDH2 2452 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 E9PAM4 449 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 J3QL48 77 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 WIPF1O43516 503 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 SH3BP5O60239 455 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 SMARCA5O60264 1052 aaPredicted RBP6.03□□□□□ -1.44
FXN-205ENST00000498653 ATP9AO75110 1047 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 RHOBTB1O94844 696 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 NDUFB10O96000 172 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 CYP2E1P05181 493 aaPredicted RBP6.03□□□□□ -1.44
FXN-205ENST00000498653 FGFR1P11362 822 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 NUCB1Q02818 461 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 TKFCQ3LXA3 575 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 TRIM61Q5EBN2 209 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 NSMFQ6X4W1 530 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 CYP2U1Q7Z449 544 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 GLRX5Q86SX6 157 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 CHD1LQ86WJ1 897 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 ZNF280BQ86YH2 543 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 CLASRPQ8N2M8 674 aaKnown RBP6.03□□□□□ -1.44
FXN-205ENST00000498653 EXD3Q8N9H8 876 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 PPTC7Q8NI37 304 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 SNRNP27Q8WVK2 155 aaKnown RBP6.03□□□□□ -1.44
FXN-205ENST00000498653 GLMNQ92990 594 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 C16orf70Q9BSU1 422 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 PI4K2AQ9BTU6 479 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 FTHL17Q9BXU8 183 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 PLA2G2FQ9BZM2 168 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 BCL11AQ9H165 835 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 RNPEPQ9H4A4 650 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 IL1RAPL2Q9NP60 686 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 FSCN3Q9NQT6 498 aa6.03□□□□□ -1.44
FXN-205ENST00000498653 KIAA1522Q9P206 1035 aaPredicted RBP6.03□□□□□ -1.44
FXN-205ENST00000498653 ADD3Q9UEY8 706 aaKnown RBP6.03□□□□□ -1.44
FXN-205ENST00000498653 ARHGEF17Q96PE2 2063 aaPredicted RBP6.02□□□□□ -1.45
FXN-205ENST00000498653 POM121CA8CG34 1229 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 ESPNB1AK53 854 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 PLK4O00444 970 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 MGEA5O60502 916 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 IFIT2P09913 472 aaKnown RBP6.02□□□□□ -1.45
FXN-205ENST00000498653 ALAS1P13196 640 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 HLA-EP13747 358 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 IBSPP21815 317 aaPredicted RBP6.02□□□□□ -1.45
FXN-205ENST00000498653 GRM5P41594 1212 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 RAB15P59190 212 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 CCDC173Q0VFZ6 552 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 GIT2Q14161 759 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 TNNI3KQ59H18 835 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 INTS6LQ5JSJ4 861 aaKnown RBP6.02□□□□□ -1.45
FXN-205ENST00000498653 C1QL3Q5VWW1 255 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 PKN3Q6P5Z2 889 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 SLC30A10Q6XR72 485 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 AACSQ86V21 672 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 HDDC3Q8N4P3 179 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 SPATA5Q8NB90 893 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 OR2I1PQ8NGU4 316 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 NXPE2Q96DL1 559 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 NEUROD6Q96NK8 337 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 VN1R3Q9BXE9 311 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 LNPKQ9C0E8 428 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 ALG2Q9H553 416 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 RNF19AQ9NV58 838 aa6.02□□□□□ -1.45
FXN-205ENST00000498653 CTDP1Q9Y5B0 961 aaPredicted RBP6.02□□□□□ -1.45
FXN-205ENST00000498653 FPGT-TNNI3KV9GXZ4 949 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms