RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PABPC3Q9H361 631 aaKnown RBP17.65■□□□□ 0.42
COL6A1-206ENST00000498614 AZI2Q9H6S1 392 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL6A1-206ENST00000498614 COL20A1Q9P218 1284 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 FEM1BQ9UK73 627 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 CCPG1Q9ULG6 757 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 TISP43B9A030 160 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 K7ENM7 598 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 TMEM253P0C7T8 217 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 MUTP22033 750 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 CAP2P40123 477 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 ELF3P78545 371 aaPredicted RBP17.64■□□□□ 0.41
COL6A1-206ENST00000498614 MYL7Q01449 175 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 AADACL2Q6P093 401 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 MIER3Q7Z3K6 550 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 IL31RAQ8NI17 732 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 NEK9Q8TD19 979 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 HOOK2Q96ED9 719 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 GPR88Q9GZN0 384 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 PCIF1Q9H4Z3 704 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 DONSONQ9NYP3 566 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 SUFUQ9UMX1 484 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 NFIBO00712 420 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 KCNA4P22459 653 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 MMP13P45452 471 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 DENND2CQ68D51 928 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 PADI6Q6TGC4 694 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 TAX1BP1Q86VP1 789 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 JAMLQ86YT9 394 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 LRRC34Q8IZ02 419 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 FBXO25Q8TCJ0 367 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 KCND2Q9NZV8 630 aa17.64■□□□□ 0.41
COL6A1-206ENST00000498614 KIAA0391O15091 583 aaKnown RBP17.63■□□□□ 0.41
COL6A1-206ENST00000498614 BFSP1Q12934 665 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 ALG3Q92685 438 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 PGM2Q96G03 612 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 SH2D3AQ9BRG2 576 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 CARD9Q9H257 536 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 KCNH7Q9NS40 1196 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 SEPT11Q9NVA2 429 aaKnown RBP17.63■□□□□ 0.41
COL6A1-206ENST00000498614 TAS2R14Q9NYV8 317 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 APEX2Q9UBZ4 518 aa17.63■□□□□ 0.41
COL6A1-206ENST00000498614 GRIN3BO60391 1043 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 LRRN2O75325 713 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 SLC29A2Q14542 456 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 RASA3Q14644 834 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 PPP1R7Q15435 360 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 ANGEL2Q5VTE6 544 aaKnown RBP17.62■□□□□ 0.41
COL6A1-206ENST00000498614 HIBCHQ6NVY1 386 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-206ENST00000498614 TRMT1LQ7Z2T5 733 aaKnown RBP17.62■□□□□ 0.41
COL6A1-206ENST00000498614 PIGWQ7Z7B1 504 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 UHMK1Q8TAS1 419 aaKnown RBP17.62■□□□□ 0.41
COL6A1-206ENST00000498614 CTNNBL1Q8WYA6 563 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-206ENST00000498614 RIT2Q99578 217 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 SYT11Q9BT88 431 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 TMOD4Q9NZQ9 345 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 COG5Q9UP83 839 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 ZNF536O15090 1300 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 RPTORQ8N122 1335 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 GOLGA6L10A0A0M3HER8 536 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 FAM187AA6NFU0 413 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 ASAP2O43150 1006 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 PLA2G6O60733 806 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 ATP6V1G2O95670 118 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 EZRP15311 586 aaKnown RBP17.62■□□□□ 0.41
COL6A1-206ENST00000498614 DLG4P78352 724 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 PPP2R5AQ15172 486 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 PHLDB3Q6NSJ2 640 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 PALB2Q86YC2 1186 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 C18orf8Q96DM3 657 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 STRA6Q9BX79 667 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 ZNF341Q9BYN7 854 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 THAP2Q9H0W7 228 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 FZD1Q9UP38 647 aa17.62■□□□□ 0.41
COL6A1-206ENST00000498614 DIS3Q9Y2L1 958 aaKnown RBP17.62■□□□□ 0.41
COL6A1-206ENST00000498614 RGS16O15492 202 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-206ENST00000498614 HSD17B4P51659 736 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 DGKZQ13574 1117 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 CPXCR1Q8N123 301 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 PRMT1Q99873 361 aaKnown RBP17.61■□□□□ 0.41
COL6A1-206ENST00000498614 ELAC2Q9BQ52 826 aaKnown RBP17.61■□□□□ 0.41
COL6A1-206ENST00000498614 SEMA4AQ9H3S1 761 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 GRHL1Q9NZI5 618 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 SLC12A4Q9UP95 1085 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 CCDC169A6NNP5 214 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 ICAM1P05362 532 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 KRT13P13646 458 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 SCP2P22307 547 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 PTGIRP43119 386 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 DHX34Q14147 1143 aaKnown RBP17.61■□□□□ 0.41
COL6A1-206ENST00000498614 DPY19L2Q6NUT2 758 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 ANKS4BQ8N8V4 417 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 NAP1L3Q99457 506 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-206ENST00000498614 NOD2Q9HC29 1040 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 HOMER2Q9NSB8 354 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 ZHX2Q9Y6X8 837 aa17.61■□□□□ 0.41
COL6A1-206ENST00000498614 LOXHD1Q8IVV2 1947 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 TMEM150BA6NC51 233 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms