RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TRIM55Q9BYV6 548 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 IRAK4Q9NWZ3 460 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 DNMT3BQ9UBC3 853 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 SRP68Q9UHB9 627 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 PFDN2Q9UHV9 154 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ZNF225Q9UK10 706 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PALD1Q9ULE6 856 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CNPY2Q9Y2B0 182 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 TMEM2Q9UHN6 1383 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PRXQ9BXM0 1461 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CDC42BPGQ6DT37 1551 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 TLN1Q9Y490 2541 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 TIAM2Q8IVF5 1701 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 TYW5A2RUC4 315 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 BTBD11A6QL63 1104 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 NRP2O60462 931 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 MFAP3LO75121 409 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ZNF202O95125 648 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 BRD1O95696 1058 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SLC25A27O95847 323 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 DDX5P17844 614 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 SDSP20132 328 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 IL4RP24394 825 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 LIMS1P48059 325 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 GTF2IP78347 998 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 FAM160A1Q05DH4 1040 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SNTB2Q13425 540 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 RCN1Q15293 331 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.59□□□□□ -2.15
XRN1-214ENST00000498077 PARP10Q53GL7 1025 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PRAMEF14Q5SWL7 426 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 GPATCH4Q5T3I0 446 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 L1TD1Q5T7N2 865 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 CNNM4Q6P4Q7 775 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CASC1Q6TDU7 716 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 C16orf62Q7Z3J2 963 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 IQCHQ86VS3 1027 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 RASGRP3Q8IV61 690 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ADHFE1Q8IWW8 467 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 RDH10Q8IZV5 341 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 RASSF8Q8NHQ8 419 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 DYNC2LI1Q8TCX1 351 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 GOLGA1Q92805 767 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 TTC25Q96NG3 672 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CATSPER2Q96P56 530 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 RAB34Q9BZG1 259 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SMOC1Q9H4F8 434 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 USP29Q9HBJ7 922 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 LRRC4Q9HBW1 653 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 VAT1LQ9HCJ6 419 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 DLL3Q9NYJ7 618 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 DAAM1Q9Y4D1 1078 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ACTL7BQ9Y614 415 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 AK5Q9Y6K8 562 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ZFYVE26Q68DK2 2539 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ADAMTSL1Q8N6G6 1762 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SETXQ7Z333 2677 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 CEP250Q9BV73 2442 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 KMT2BQ9UMN6 2715 aaPredicted RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 DHX15O43143 795 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 PRPF40AO75400 957 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 GPC4O75487 556 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ELNP15502 786 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 CDC27P30260 824 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 NBL1P41271 181 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 MMP13P45452 471 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 MTIF2P46199 727 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 MEOX2P50222 304 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 AQP5P55064 265 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 OTUD4Q01804 1114 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 HHEXQ03014 270 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 CREMQ03060 361 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 MTA1Q13330 715 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 SEMA3AQ14563 771 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 SAFBQ15424 915 aaKnown RBP eCLIP1.59□□□□□ -2.16
XRN1-214ENST00000498077 GRIK4Q16099 956 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 C6orf163Q5TEZ5 329 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ARMCX5Q6P1M9 558 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 C8orf86Q6ZUL3 223 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 CATSPER4Q7RTX7 472 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 NOSTRINQ8IVI9 506 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.59□□□□□ -2.167e-7■□□□□ 10.3
XRN1-214ENST00000498077 PLD6Q8N2A8 252 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 ELMO3Q96BJ8 720 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 CLIP3Q96DZ5 547 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ZNF837Q96EG3 531 aaPredicted RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 RRNAD1Q96FB5 475 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 DHTKD1Q96HY7 919 aaPredicted RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 FERMT1Q9BQL6 677 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 UPF3BQ9BZI7 483 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 DCLK3Q9C098 648 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 WWTR1Q9GZV5 400 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 TAS2R16Q9NYV7 291 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 DEC1Q9P2X7 70 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 TRPS1Q9UHF7 1281 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 APPL1Q9UKG1 709 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 AMOTL2Q9Y2J4 779 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ATP6V0A2Q9Y487 856 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 PLXNB1O43157 2135 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ANKRD11Q6UB99 2663 aaPredicted RBP1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms