RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 GAD1Q99259 594 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 ACO2Q99798 780 aaKnown RBP12.89□□□□□ -0.35
MRPL55-234ENST00000497758 TARS2Q9BW92 718 aaKnown RBP12.89□□□□□ -0.35
MRPL55-234ENST00000497758 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 SPG21Q9NZD8 308 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 PLAGL2Q9UPG8 496 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 TNFSF13BQ9Y275 285 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 NLRC5Q86WI3 1866 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 REV3LO60673 3130 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 FGF18O76093 207 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 PBX3P40426 434 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
MRPL55-234ENST00000497758 BCAR1P56945 870 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 KRT17Q04695 432 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 UBE3AQ05086 875 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 E2F4Q16254 413 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 ZBTB33Q86T24 672 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 SFR1Q86XK3 245 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 CEP57L1Q8IYX8 460 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 ZFP42Q96MM3 310 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 TNMDQ9H2S6 317 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 MAGEF1Q9HAY2 307 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 KLK14Q9P0G3 267 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 ANKFY1Q9P2R3 1169 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
MRPL55-234ENST00000497758 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 GDAQ9Y2T3 454 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 ZMYM2Q9UBW7 1377 aa12.88□□□□□ -0.35
MRPL55-234ENST00000497758 MYH11P35749 1972 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 HNRNPDLO14979 420 aaKnown RBP12.87□□□□□ -0.35
MRPL55-234ENST00000497758 NR1I2O75469 434 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 TOM1L1O75674 476 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 RECQL4O94761 1208 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
MRPL55-234ENST00000497758 CMA1P23946 247 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 LIG4P49917 911 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 SCNN1GP51170 649 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 AFF1P51825 1210 aaKnown RBP12.87□□□□□ -0.35
MRPL55-234ENST00000497758 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 HERC4Q5GLZ8 1057 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-234ENST00000497758 ADALQ6DHV7 355 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 MPZL3Q6UWV2 235 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 ZPBP2Q6X784 338 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 CCDC65Q8IXS2 484 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 SPPL3Q8TCT6 385 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 STAMQ92783 540 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 PPP2R3CQ969Q6 453 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 TMEM169Q96HH4 297 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 CCDC94Q9BW85 323 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-234ENST00000497758 CDT1Q9H211 546 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 NSUN3Q9H649 340 aaKnown RBP12.87□□□□□ -0.35
MRPL55-234ENST00000497758 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 MRPL44Q9H9J2 332 aaKnown RBP12.87□□□□□ -0.35
MRPL55-234ENST00000497758 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 SNTG2Q9NY99 539 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 TBX20Q9UMR3 447 aa12.87□□□□□ -0.35
MRPL55-234ENST00000497758 UNC80Q8N2C7 3258 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 INPPL1O15357 1258 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 CLDN3O15551 220 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 MCF2P10911 925 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 NMT1P30419 496 aaKnown RBP12.86□□□□□ -0.35
MRPL55-234ENST00000497758 YARSP54577 528 aaKnown RBP12.86□□□□□ -0.35
MRPL55-234ENST00000497758 ASIC1P78348 528 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 PLCB3Q01970 1234 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 GRIK3Q13003 919 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.35
MRPL55-234ENST00000497758 ZNF280BQ86YH2 543 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 SLC39A11Q8N1S5 342 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 DNAJC19Q96DA6 116 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 TMEM175Q9BSA9 504 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 TLR9Q9NR96 1032 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-234ENST00000497758 KBTBD4Q9NVX7 518 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 TBC1D7Q9P0N9 293 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-234ENST00000497758 LZTS1Q9Y250 596 aa12.86□□□□□ -0.35
MRPL55-234ENST00000497758 KIAA1671Q9BY89 1806 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-234ENST00000497758 A0A1B0GVL5 298 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 NT5C1B-RDH14C9J2C7 533 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 GCNT3O95395 438 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 ALDH2P05091 517 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 GALTP07902 379 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 PFKFB1P16118 471 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 PROZP22891 400 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 GRM5P41594 1212 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 SLC11A1P49279 550 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 OSTNP61366 133 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 GTF2BQ00403 316 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
MRPL55-234ENST00000497758 TCEAL5Q5H9L2 206 aa12.85□□□□□ -0.35
MRPL55-234ENST00000497758 STXBP4Q6ZWJ1 553 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms