RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 LIG4P49917 911 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 DSC3Q14574 896 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 SKIV2LQ15477 1246 aaKnown RBP21.95■■□□□ 1.1
CTSD-206ENST00000497544 TCTN1Q2MV58 587 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 ATF7IP2Q5U623 682 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 RTN4RL1Q86UN2 441 aaPredicted RBP21.95■■□□□ 1.1
CTSD-206ENST00000497544 MAP4K3Q8IVH8 894 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 MYOCDQ8IZQ8 938 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 KIAA0895Q8NCT3 520 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 GLIS3Q8NEA6 775 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 ACO2Q99798 780 aaKnown RBP21.95■■□□□ 1.1
CTSD-206ENST00000497544 ADPGKQ9BRR6 497 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 TCHPQ9BT92 498 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 MSRAQ9UJ68 235 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 GDAQ9Y2T3 454 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 CNTNAP2Q9UHC6 1331 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 ZBBXA8MT70 800 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 PI4K2BG5E9Z4 385 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 MGEA5O60502 916 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 BAIAP3O94812 1187 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 MATR3P43243 847 aaKnown RBP eCLIP21.94■■□□□ 1.1
CTSD-206ENST00000497544 RAB30Q15771 203 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 ZPBP2Q6X784 338 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 EPM2AIP1Q7L775 607 aaPredicted RBP21.94■■□□□ 1.1
CTSD-206ENST00000497544 APBB1IPQ7Z5R6 666 aaPredicted RBP21.94■■□□□ 1.1
CTSD-206ENST00000497544 NELFCDQ8IXH7 590 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 TRIML1Q8N9V2 468 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 SCFD1Q8WVM8 642 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 CCDC51Q96ER9 411 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 MTIF3Q9H2K0 278 aaKnown RBP21.94■■□□□ 1.1
CTSD-206ENST00000497544 RGS18Q9NS28 235 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 C1orf112Q9NSG2 853 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 TMEM63CQ9P1W3 806 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 TNFSF13BQ9Y275 285 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 YBX2Q9Y2T7 364 aaKnown RBP21.94■■□□□ 1.1
CTSD-206ENST00000497544 UBE4BO95155 1302 aa21.94■■□□□ 1.1
CTSD-206ENST00000497544 TTLL13PA6NNM8 815 aa21.93■■□□□ 1.1
CTSD-206ENST00000497544 HNRNPDLO14979 420 aaKnown RBP21.93■■□□□ 1.1
CTSD-206ENST00000497544 EDN1P05305 212 aa21.93■■□□□ 1.1
CTSD-206ENST00000497544 KCNA1Q09470 495 aa21.93■■□□□ 1.1
CTSD-206ENST00000497544 MORC3Q14149 939 aa21.93■■□□□ 1.1
CTSD-206ENST00000497544 SLC24A5Q71RS6 500 aa21.93■■□□□ 1.1
CTSD-206ENST00000497544 CDR2LQ86X02 465 aaPredicted RBP21.93■■□□□ 1.1
CTSD-206ENST00000497544 HERVK_113Q902F9 699 aa21.93■■□□□ 1.1
CTSD-206ENST00000497544 MICAL3Q7RTP6 2002 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 PRR33A8MZF0 331 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 PIGRP01833 764 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 SKIP12755 728 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 IBSPP21815 317 aaPredicted RBP21.92■■□□□ 1.1
CTSD-206ENST00000497544 KCNJ6P48051 423 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 SLFN12LQ6IEE8 588 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 SLC27A1Q6PCB7 646 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 TRIM6Q9C030 488 aaPredicted RBP21.92■■□□□ 1.1
CTSD-206ENST00000497544 PDZD7Q9H5P4 517 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 SLC28A3Q9HAS3 691 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 MAPK8IP1Q9UQF2 711 aa21.92■■□□□ 1.1
CTSD-206ENST00000497544 CLDN3O15551 220 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 TOM1L1O75674 476 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 NPTXRO95502 500 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 STIM1Q13586 685 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 KNOP1Q1ED39 458 aaKnown RBP21.91■■□□□ 1.1
CTSD-206ENST00000497544 ZNF568Q3ZCX4 644 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 EEF1DP3Q658K8 133 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 SMYD4Q8IYR2 804 aaPredicted RBP21.91■■□□□ 1.1
CTSD-206ENST00000497544 GUF1Q8N442 669 aaKnown RBP21.91■■□□□ 1.1
CTSD-206ENST00000497544 ZBTB45Q96K62 511 aaPredicted RBP21.91■■□□□ 1.1
CTSD-206ENST00000497544 TRAIPQ9BWF2 469 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 GBP3Q9H0R5 595 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 CD320Q9NPF0 282 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 FAM105AQ9NUU6 356 aa21.91■■□□□ 1.1
CTSD-206ENST00000497544 RNF216Q9NWF9 866 aaPredicted RBP21.91■■□□□ 1.1
CTSD-206ENST00000497544 A0A0U1RQF3 1178 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.9■■□□□ 1.1
CTSD-206ENST00000497544 C9IYK1 514 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 ANKRD63C9JTQ0 380 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 AMHP03971 560 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 PPP1R2P41236 205 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 PRCPP42785 496 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 RAB27AP51159 221 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 BMT2Q1RMZ1 405 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 UBXN11Q5T124 520 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 SASS6Q6UVJ0 657 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 MPZL3Q6UWV2 235 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.9■■□□□ 1.13e-9■■□□□ 13
CTSD-206ENST00000497544 RBM43Q6ZSC3 357 aaKnown RBP21.9■■□□□ 1.1
CTSD-206ENST00000497544 HS2ST1Q7LGA3 356 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 ZBTB33Q86T24 672 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 LINC01599Q8WXQ3 324 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 EIF2AQ9BY44 585 aaKnown RBP21.9■■□□□ 1.1
CTSD-206ENST00000497544 ANKFY1Q9P2R3 1169 aa21.9■■□□□ 1.1
CTSD-206ENST00000497544 TTC3P53804 2025 aa21.89■■□□□ 1.1
CTSD-206ENST00000497544 LETM1O95202 739 aaPredicted RBP21.89■■□□□ 1.09
CTSD-206ENST00000497544 STAG3L1P0CL83 205 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 HOXD13P35453 343 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 WDR5P61964 334 aaKnown RBP21.89■■□□□ 1.09
CTSD-206ENST00000497544 FAM189BP81408 668 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 DCAF4L1Q3SXM0 396 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 COBLL1Q53SF7 1204 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 POMGNT1Q8WZA1 660 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 IKZF4Q9H2S9 585 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms