RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 OR7D4Q8NG98 312 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 LMF1Q96S06 567 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 DPYSL5Q9BPU6 564 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 XYLT2Q9H1B5 865 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 AGO3Q9H9G7 860 aaKnown RBP6.22□□□□□ -1.41
VPS36-206ENST00000497149 GEMIN8Q9NWZ8 242 aaKnown RBP6.22□□□□□ -1.41
VPS36-206ENST00000497149 OAZ3Q9UMX2 235 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 OTOL1A6NHN0 477 aaPredicted RBP6.21□□□□□ -1.42
VPS36-206ENST00000497149 LAMTOR5O43504 91 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 DTNBO60941 627 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 CNR2P34972 360 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 SREBF1P36956 1147 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 CASRP41180 1078 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 DSC2Q02487 901 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 FRMD5Q7Z6J6 570 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 GPR135Q8IZ08 494 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 PQLC1Q8N2U9 271 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 SHCBP1Q8NEM2 672 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 OR5M3Q8NGP4 307 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 RELTQ969Z4 430 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 MVB12AQ96EY5 273 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 CYFIP2Q96F07 1278 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 LRRC37BQ96QE4 947 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 MAP3K14Q99558 947 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 PTPN18Q99952 460 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 ENKD1Q9H0I2 346 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 ZCCHC4Q9H5U6 513 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 MSL2Q9HCI7 577 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 IL23AQ9NPF7 189 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 NCDNQ9UBB6 729 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 RCAN3Q9UKA8 241 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 PCDHB1Q9Y5F3 818 aa6.21□□□□□ -1.42
VPS36-206ENST00000497149 CFAP20Q9Y6A4 193 aaKnown RBP6.21□□□□□ -1.42
VPS36-206ENST00000497149 UBE2QL1A1L167 161 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 KIF3BO15066 747 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 ADCY6O43306 1168 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 CDC14BO60729 498 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 NPEPPSP55786 919 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 RIN1Q13671 783 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 PGS1Q32NB8 556 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 ZFYVE27Q5T4F4 411 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 SLFN13Q68D06 897 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 PPP4R3AQ6IN85 833 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 GRAMD1CQ8IYS0 662 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 KAT5Q92993 513 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 C1GALT1C1Q96EU7 318 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 TAAR9Q96RI9 348 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 UHRF1Q96T88 793 aaPredicted RBP6.2□□□□□ -1.42
VPS36-206ENST00000497149 CDC5LQ99459 802 aaKnown RBP6.2□□□□□ -1.42
VPS36-206ENST00000497149 PDCD2LQ9BRP1 358 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 NELFAQ9H3P2 528 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 MANSC1Q9H8J5 431 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 PARD6AQ9NPB6 346 aa6.2□□□□□ -1.42
VPS36-206ENST00000497149 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.2□□□□□ -1.42
VPS36-206ENST00000497149 VSTM5A8MXK1 200 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 SGTAO43765 313 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 RPLP2P05387 115 aaKnown RBP6.19□□□□□ -1.42
VPS36-206ENST00000497149 PDZD4Q76G19 769 aaPredicted RBP6.19□□□□□ -1.42
VPS36-206ENST00000497149 TTC7BQ86TV6 843 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 TAX1BP1Q86VP1 789 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 TRMT2AQ8IZ69 625 aaKnown RBP6.19□□□□□ -1.42
VPS36-206ENST00000497149 REPS2Q8NFH8 660 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 CCHCR1Q8TD31 782 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 DIS3LQ8TF46 1054 aaKnown RBP6.19□□□□□ -1.42
VPS36-206ENST00000497149 RUNDC1Q96C34 613 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 CCDC136Q96JN2 1154 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 MEGF9Q9H1U4 602 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 TDP1Q9NUW8 608 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 ZNF536O15090 1300 aa6.19□□□□□ -1.42
VPS36-206ENST00000497149 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 ERC2O15083 957 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 CTNND1O60716 968 aaKnown RBP6.18□□□□□ -1.42
VPS36-206ENST00000497149 AMY1AP04745 511 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 GUCY1A2P33402 732 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 PTPN7P35236 360 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 GZMKP49863 264 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 CDC42EP1Q00587 391 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 APBA1Q02410 837 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 DUSP8Q13202 625 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 MRPL49Q13405 166 aaKnown RBP6.18□□□□□ -1.42
VPS36-206ENST00000497149 TBC1D10BQ4KMP7 808 aaPredicted RBP6.18□□□□□ -1.42
VPS36-206ENST00000497149 ARHGAP29Q52LW3 1261 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 PRAMEF14Q5SWL7 426 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 NOL8Q76FK4 1167 aaKnown RBP6.18□□□□□ -1.42
VPS36-206ENST00000497149 DRC7Q8IY82 874 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 MDM1Q8TC05 714 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 NSUN6Q8TEA1 469 aaKnown RBP6.18□□□□□ -1.42
VPS36-206ENST00000497149 STON2Q8WXE9 905 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 IL17RAQ96F46 866 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 GNRHR2Q96P88 292 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 DMRTA2Q96SC8 542 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 ACO2Q99798 780 aaKnown RBP6.18□□□□□ -1.42
VPS36-206ENST00000497149 TCF25Q9BQ70 676 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 LDAHQ9H6V9 325 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 LANCL2Q9NS86 450 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 OBP2AQ9NY56 170 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 PPP4R1LQ9P1A2 415 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 MYBBP1AQ9BQG0 1328 aaKnown RBP6.18□□□□□ -1.42
VPS36-206ENST00000497149 ZMYM3Q14202 1370 aa6.18□□□□□ -1.42
VPS36-206ENST00000497149 NPEPPSL1A6NEC2 478 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms