RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 HELLSQ9NRZ9 838 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 MYO6Q9UM54 1294 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 ZKSCAN5Q9Y2L8 839 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF711Q9Y462 761 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 TTC34A8MYJ7 566 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 BIN1O00499 593 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ATP8B1O43520 1251 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 SIGLEC6O43699 453 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KCNJ13O60928 360 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TIPRLO75663 272 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 MBD4O95243 580 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 GSTM1P09488 218 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 POU3F3P20264 500 aaPredicted RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 HSD17B2P37059 387 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 EPS15P42566 896 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 BASP1P80723 227 aaKnown RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TMF1P82094 1093 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TCIRG1Q13488 830 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 SQSTM1Q13501 440 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 RAB33AQ14088 237 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 RTP2Q5QGT7 225 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ADGRF1Q5T601 910 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ABRAXAS1Q6UWZ7 409 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CEP68Q76N32 757 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PNMA8AQ86V59 439 aaPredicted RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 NLRP14Q86W24 1093 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CEP57Q86XR8 500 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 WDR63Q8IWG1 891 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 IQUBQ8NA54 791 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TMEM52Q8NDY8 209 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 NRBF2Q96F24 287 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CSRNP2Q9H175 543 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KIF9Q9HAQ2 790 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PLCB1Q9NQ66 1216 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 IL1RAPL1Q9NZN1 696 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TUBGCP4Q9UGJ1 667 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 SUSD2Q9UGT4 822 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ZMYM5Q9UJ78 669 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 MCM8Q9UJA3 840 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 LAMP5Q9UJQ1 280 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF214Q9UL59 606 aaPredicted RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 RIMKLBQ9ULI2 386 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CD2APQ9Y5K6 639 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC4A7Q9Y6M7 1214 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 SYNDIG1LA6NDD5 238 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TMEM232C9JQI7 657 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KCNH1O95259 989 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 YEATS4O95619 227 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 APBB3O95704 486 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CAVIN2O95810 425 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 IVLP07476 585 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KRT20P35900 424 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KIR3DL1P43629 444 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PDE6CP51160 858 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 BLVRAP53004 296 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 RRP1P56182 461 aaKnown RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PFKPQ01813 784 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 DPYSQ14117 519 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 BTG3Q14201 252 aaPredicted RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PLCB4Q15147 1175 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PPP1R7Q15435 360 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KCNMB1Q16558 191 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CAVIN4Q5BKX8 364 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TRIM68Q6AZZ1 485 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CRTC1Q6UUV9 634 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 NCCRP1Q6ZVX7 275 aaPredicted RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TAOK1Q7L7X3 1001 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 EEPD1Q7L9B9 569 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ZSWIM9Q86XI8 627 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 SPATA2LQ8IUW3 424 aaPredicted RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 AADATQ8N5Z0 425 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CCDC148Q8NFR7 591 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 CDKL2Q92772 493 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 MTMR8Q96EF0 704 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 TM9SF2Q99805 663 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 GPR62Q9BZJ7 368 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 KCTD10Q9H3F6 313 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PARVGQ9HBI0 331 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 STARD7Q9NQZ5 370 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ARGLU1Q9NWB6 273 aaPredicted RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 SAGE1Q9NXZ1 904 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 PAIP2BQ9ULR5 123 aaKnown RBP3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF510Q9Y2H8 683 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ANGPTL3Q9Y5C1 460 aa3.4□□□□□ -1.87
SNRNP48-202ENST00000496946 ROBO2Q9HCK4 1378 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 TARSL2A2RTX5 802 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 HNRNPCL2B2RXH8 293 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 AHCYL1O43865 530 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 HNRNPCL1O60812 293 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 IL33O95760 270 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CYP17A1P05093 508 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ZSCAN22P10073 491 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 MTHFD1P11586 935 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 RPS2P15880 293 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC16A2P36021 539 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 MAPK9P45984 424 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 LIMK1P53667 647 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 PMS1P54277 932 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 GJA9P57773 515 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms