RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CSADQ9Y600 493 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 ESYT3A0FGR9 886 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 ERICH4A6NGS2 130 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 AGPSO00116 658 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-220ENST00000496711 DDX3YO15523 660 aaKnown RBP14.07□□□□□ -0.16
GARNL3-220ENST00000496711 RTN2O75298 545 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 CLSTN1O94985 981 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 SGPL1O95470 568 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 SCP2P22307 547 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 CARSP49589 748 aaKnown RBP14.07□□□□□ -0.16
GARNL3-220ENST00000496711 LIG4P49917 911 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 C11orf63Q6NUN7 778 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 HELQQ8TDG4 1101 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 TAS1R2Q8TE23 839 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 ZNF526Q8TF50 670 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-220ENST00000496711 CASKIN2Q8WXE0 1202 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 KCNN1Q92952 543 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 POP1Q99575 1024 aaKnown RBP14.07□□□□□ -0.16
GARNL3-220ENST00000496711 FAM204AQ9H8W3 233 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.07□□□□□ -0.16
GARNL3-220ENST00000496711 RAB20Q9NX57 234 aa14.07□□□□□ -0.16
GARNL3-220ENST00000496711 TTC7AQ9ULT0 858 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-220ENST00000496711 KRIT1O00522 736 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 CYP26A1O43174 497 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 FTLP02792 175 aaPredicted RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 DLATP10515 647 aaKnown RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 GZMAP12544 262 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 CHRNB2P17787 502 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 UBA1P22314 1058 aaKnown RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 LMAN1P49257 510 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 PDE6CP51160 858 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 STRN3Q13033 797 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 SEPT14Q6ZU15 432 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 GOLGA6L1Q8N7Z2 621 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 IFT81Q8WYA0 676 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 FAM213AQ9BRX8 229 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 AP1M1Q9BXS5 423 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 CARD9Q9H257 536 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 PLEKHA4Q9H4M7 779 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 KIAA1586Q9HCI6 787 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 BTBD7Q9P203 1132 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 CTTNBP2NLQ9P2B4 639 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 FAM170AA1A519 330 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 ZNF233A6NK53 670 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 EXTL3O43909 919 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 ATP4AP20648 1035 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 NAMPTP43490 491 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 GPC5P78333 572 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 FSTL1Q12841 308 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 SV2AQ7L0J3 742 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 SLC47A2Q86VL8 602 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 EIF1ADQ8N9N8 165 aaKnown RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 TSEN2Q8NCE0 465 aaKnown RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 AFAP1L1Q8TED9 768 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 WHAMMQ8TF30 809 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 FBXO41Q8TF61 875 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 CNKSR2Q8WXI2 1034 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 RIN2Q8WYP3 895 aaPredicted RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 PCDHB18PQ96TA0 734 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 PORCNQ9H237 461 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 SLITRK6Q9H5Y7 841 aa14.06□□□□□ -0.16
GARNL3-220ENST00000496711 DHX33Q9H6R0 707 aaKnown RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 ADARB2Q9NS39 739 aaKnown RBP14.06□□□□□ -0.16
GARNL3-220ENST00000496711 IGKV6D-21A0A0A0MT36 114 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 CCDC66A2RUB6 948 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 HSF2BPO75031 334 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 MTA2O94776 668 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 CYP11B1P15538 503 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 EDNRBP24530 442 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 FMO1Q01740 532 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 PRPF4BQ13523 1007 aaKnown RBP14.05□□□□□ -0.16
GARNL3-220ENST00000496711 DCAF12L1Q5VU92 463 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 ALS2CLQ60I27 953 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 GADL1Q6ZQY3 521 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 ENOSF1Q7L5Y1 443 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 MREGQ8N565 214 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
GARNL3-220ENST00000496711 ASAP3Q8TDY4 903 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 SLC7A3Q8WY07 619 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 TMEM143Q96AN5 459 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 FAM81BQ96LP2 452 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 RUFY1Q96T51 708 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 NIFKQ9BYG3 293 aaKnown RBP14.05□□□□□ -0.16
GARNL3-220ENST00000496711 SPATC1LQ9H0A9 340 aa14.05□□□□□ -0.16
GARNL3-220ENST00000496711 DDX47Q9H0S4 455 aaKnown RBP14.05□□□□□ -0.16
GARNL3-220ENST00000496711 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
GARNL3-220ENST00000496711 MIF4GDA9UHW6 222 aaKnown RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 ADM5C9JUS6 153 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 SART1O43290 800 aaKnown RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 OPA1O60313 960 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 PEX10O60683 326 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 FARP2O94887 1054 aaPredicted RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 PIGRP01833 764 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 FGGP02679 453 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 MMEP08473 750 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms