RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 TMEM206Q9H813 350 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 SLC39A2Q9NP94 309 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 IPPQ9Y573 584 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 FNDC1Q4ZHG4 1894 aaPredicted RBP10.58□□□□□ -0.72
PRPF3-207ENST00000496202 TBKBP1A7MCY6 615 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 ZNF623O75123 536 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 PPP1R37O75864 691 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 PRPF6O94906 941 aaKnown RBP10.58□□□□□ -0.72
PRPF3-207ENST00000496202 RHOBTB3O94955 611 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 KIF20AO95235 890 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 PIGRP01833 764 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 MCF2P10911 925 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 FGFR1P11362 822 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 PTMSP20962 102 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 DNAJB2P25686 324 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 MCM4P33991 863 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 EHHADHQ08426 723 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 BTG3Q14201 252 aaPredicted RBP10.58□□□□□ -0.72
PRPF3-207ENST00000496202 KCNB1Q14721 858 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 PAN2Q504Q3 1202 aaKnown RBP10.58□□□□□ -0.72
PRPF3-207ENST00000496202 HABP4Q5JVS0 413 aaKnown RBP10.58□□□□□ -0.72
PRPF3-207ENST00000496202 SLFN12LQ6IEE8 588 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 ELOA2Q8IYF1 753 aaPredicted RBP10.58□□□□□ -0.72
PRPF3-207ENST00000496202 URGCPQ8TCY9 931 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 RSPH1Q8WYR4 309 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 LPPQ93052 612 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 GSDMAQ96QA5 445 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 RPS6KC1Q96S38 1066 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 FGFBP2Q9BYJ0 223 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 CDT1Q9H211 546 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 CLSTN2Q9H4D0 955 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 NXF3Q9H4D5 531 aaKnown RBP10.58□□□□□ -0.72
PRPF3-207ENST00000496202 UBN1Q9NPG3 1134 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 PARP2Q9UGN5 583 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 INPP5FQ9Y2H2 1132 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 HES2Q9Y543 173 aa10.58□□□□□ -0.72
PRPF3-207ENST00000496202 TRIP11Q15643 1979 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 DGKIO75912 1065 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 ATF7P17544 494 aaPredicted RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 GATMP50440 423 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 YARSP54577 528 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 RNASELQ05823 741 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 CAMK4Q16566 473 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 KYAT1Q16773 422 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 HS2ST1Q7LGA3 356 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 MRPL10Q7Z7H8 261 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 NELFCDQ8IXH7 590 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 THNSL1Q8IYQ7 743 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 CMTR2Q8IYT2 770 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 FIBCD1Q8N539 461 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 SMG8Q8ND04 991 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 GLIS3Q8NEA6 775 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 HELQQ8TDG4 1101 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 POMGNT1Q8WZA1 660 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 ERCC4Q92889 916 aaPredicted RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 TIFAQ96CG3 184 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 ZBTB45Q96K62 511 aaPredicted RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 MSTO1Q9BUK6 570 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 MRPL9Q9BYD2 267 aaKnown RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 PBX4Q9BYU1 374 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 TMEM117Q9H0C3 514 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 GBP3Q9H0R5 595 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 NUP62CLQ9H1M0 184 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 RSAD1Q9HA92 442 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 SLC28A3Q9HAS3 691 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 TOPORSQ9NS56 1045 aaPredicted RBP10.57□□□□□ -0.72
PRPF3-207ENST00000496202 GDAQ9Y2T3 454 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 PCDHA5Q9Y5H7 936 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 NLRC5Q86WI3 1866 aa10.57□□□□□ -0.72
PRPF3-207ENST00000496202 TDRD15B5MCY1 1934 aaKnown RBP10.56□□□□□ -0.72
PRPF3-207ENST00000496202 ZMYM2Q9UBW7 1377 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 OGTO15294 1046 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 RECQL4O94761 1208 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 CA3P07451 260 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 MYOGP15173 224 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 PROZP22891 400 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 PBX2P40425 430 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 GRM5P41594 1212 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 OSTNP61366 133 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 HTRA4P83105 476 aaPredicted RBP10.56□□□□□ -0.72
PRPF3-207ENST00000496202 MCL1Q07820 350 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 KCNA1Q09470 495 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 STK4Q13043 487 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 STIM1Q13586 685 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 HSP90AA2PQ14568 343 aaPredicted RBP10.56□□□□□ -0.72
PRPF3-207ENST00000496202 NOMO2Q5JPE7 1267 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 CLLU1OSQ5K130 101 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 PPP2R2DQ66LE6 453 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 ARMCX5Q6P1M9 558 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 EPM2AIP1Q7L775 607 aaPredicted RBP10.56□□□□□ -0.72
PRPF3-207ENST00000496202 LRRC43Q8N309 656 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 KIAA0895Q8NCT3 520 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 GOLGA5Q8TBA6 731 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 ZNF507Q8TCN5 953 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 NOC3LQ8WTT2 800 aaKnown RBP10.56□□□□□ -0.72
PRPF3-207ENST00000496202 SCFD1Q8WVM8 642 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 ACAP3Q96P50 834 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms