RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 TOM1L1O75674 476 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 IPO7O95373 1038 aaKnown RBP17.77■□□□□ 0.44
HLA-A-208ENST00000496081 LCA5LO95447 670 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 F2P00734 622 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 MATR3P43243 847 aaKnown RBP eCLIP17.77■□□□□ 0.44
HLA-A-208ENST00000496081 CYP27A1Q02318 531 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 MAP2K1Q02750 393 aaPredicted RBP17.77■□□□□ 0.44
HLA-A-208ENST00000496081 ARID5AQ03989 594 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 POU5F1BQ06416 359 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 KRT39Q6A163 491 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 PHLDB3Q6NSJ2 640 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 NFKBIZQ9BYH8 718 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.44
HLA-A-208ENST00000496081 DEF6Q9H4E7 631 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 MINDY3Q9H8M7 445 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 IFT122Q9HBG6 1241 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 DNAI1Q9UI46 699 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 Q9Y3F1 56 aa17.77■□□□□ 0.44
HLA-A-208ENST00000496081 INO80B-WBP1J3KQ70 363 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 ACKR2O00590 384 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 DLATP10515 647 aaKnown RBP17.76■□□□□ 0.43
HLA-A-208ENST00000496081 TMOD1P28289 359 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 GTF2H1P32780 548 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 WNT7BP56706 349 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 GNG11P61952 73 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 CLDN10P78369 228 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 MBTD1Q05BQ5 628 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 KLHL30Q0D2K2 578 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 PSMD6Q15008 389 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 ZBTB41Q5SVQ8 909 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 TRPV1Q8NER1 839 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 STK33Q9BYT3 514 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
HLA-A-208ENST00000496081 SETD4Q9NVD3 440 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 AKT3Q9Y243 479 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 COQ4Q9Y3A0 265 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 DAAM1Q9Y4D1 1078 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 A0A087WZ62 844 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 ABLIM1O14639 778 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 AKR1B10O60218 316 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 VTNP04004 478 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 FLT3LGP49771 235 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 CPT1AP50416 773 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 SPA17Q15506 151 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 KIAA0753Q2KHM9 967 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 ZNF662Q6ZS27 426 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 SV2AQ7L0J3 742 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 TRIB2Q92519 343 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 WDR24Q96S15 920 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 FDXACB1Q9BRP7 624 aaPredicted RBP17.76■□□□□ 0.43
HLA-A-208ENST00000496081 GPR88Q9GZN0 384 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 AP5M1Q9H0R1 490 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 TFR2Q9UP52 801 aa17.76■□□□□ 0.43
HLA-A-208ENST00000496081 RRN3P2A6NIE6 340 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 FAM189A1O60320 539 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 TBC1D8O95759 1140 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 IQCF3P0C7M6 154 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 AKR1A1P14550 325 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 PRKCIP41743 596 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 STAT1P42224 750 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 PHKA2P46019 1235 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 BEX3Q00994 111 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 HSP90AA2PQ14568 343 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-208ENST00000496081 DRAP1Q14919 205 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-208ENST00000496081 ENOX2Q16206 610 aaKnown RBP17.75■□□□□ 0.43
HLA-A-208ENST00000496081 TSHZ1Q6ZSZ6 1077 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 ZBTB33Q86T24 672 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 IFNLR1Q8IU57 520 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-208ENST00000496081 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 ZNF516Q92618 1163 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 SEMA4DQ92854 862 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 PPP1R16BQ96T49 567 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 TCHPQ9BT92 498 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 HAUS4Q9H6D7 363 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 RBAKQ9NYW8 714 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-208ENST00000496081 TRIM10Q9UDY6 481 aa17.75■□□□□ 0.43
HLA-A-208ENST00000496081 RCCD1A6NED2 376 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 F8VZ95 297 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 B4GALT5O43286 388 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PNMA6AP0CW24 399 aaPredicted RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 SMIM10L2AP0DMW4 78 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 SMIM10L2BP0DMW5 78 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 HARSP12081 509 aaKnown RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 RFX1P22670 979 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PROZP22891 400 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 TERF1P54274 439 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 CHMP4BP1P59074 171 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 CAP1Q01518 475 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PRKCZQ05513 592 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 GFPT1Q06210 699 aaPredicted RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 MCL1Q07820 350 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PRPF4BQ13523 1007 aaKnown RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 SEZ6Q53EL9 994 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 KIAA1328Q86T90 577 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 ARHGEF19Q8IW93 802 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 REM2Q8IYK8 340 aaPredicted RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 KIAA0319LQ8IZA0 1049 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 DNAJC5GQ8N7S2 189 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms