RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SYCE2Q6PIF2 218 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 GSTCDQ8NEC7 633 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 ZFP42Q96MM3 310 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 COLEC11Q9BWP8 271 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 APOL6Q9BWW8 343 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 VN1R3Q9BXE9 311 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 EMILIN2Q9BXX0 1053 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 PDZD7Q9H5P4 517 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 DZANK1Q9NVP4 752 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 RBM19Q9Y4C8 960 aaKnown RBP26.72■■□□□ 1.87
HLA-C-209ENST00000495835 LOC730098B7Z3J9 87 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 K7ERI5 159 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 DCXO43602 365 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 EFEMP2O95967 443 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 SOD2P04179 222 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 AKAP5P24588 427 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 CDC25AP30304 524 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 CA8P35219 290 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 OR1G1P47890 313 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 CBX2Q14781 532 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-209ENST00000495835 PTPN14Q15678 1187 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 TMEM132AQ24JP5 1023 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 RINT1Q6NUQ1 792 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 LLGL2Q6P1M3 1020 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 C1orf186Q6ZWK4 172 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 APBB1IPQ7Z5R6 666 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-209ENST00000495835 CDR2LQ86X02 465 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-209ENST00000495835 GPR65Q8IYL9 337 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 TMEM134Q9H6X4 195 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 MRPL17Q9NRX2 175 aaKnown RBP26.71■■□□□ 1.87
HLA-C-209ENST00000495835 KCND2Q9NZV8 630 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 PARP2Q9UGN5 583 aa26.71■■□□□ 1.87
HLA-C-209ENST00000495835 LILRB3O75022 631 aa26.7■■□□□ 1.86
HLA-C-209ENST00000495835 GUCY2CP25092 1073 aa26.7■■□□□ 1.86
HLA-C-209ENST00000495835 DCAF4L1Q3SXM0 396 aa26.7■■□□□ 1.86
HLA-C-209ENST00000495835 RPS6KC1Q96S38 1066 aa26.7■■□□□ 1.86
HLA-C-209ENST00000495835 MARCH5Q9NX47 278 aa26.7■■□□□ 1.86
HLA-C-209ENST00000495835 VWA3AA6NCI4 1184 aa26.69■■□□□ 1.86
HLA-C-209ENST00000495835 CES5AQ6NT32 575 aa26.69■■□□□ 1.86
HLA-C-209ENST00000495835 RNF168Q8IYW5 571 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-209ENST00000495835 SYT2Q8N9I0 419 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-209ENST00000495835 SLC22A17Q8WUG5 538 aa26.69■■□□□ 1.86
HLA-C-209ENST00000495835 NECTIN4Q96NY8 510 aa26.69■■□□□ 1.86
HLA-C-209ENST00000495835 NTPCRQ9BSD7 190 aaKnown RBP26.69■■□□□ 1.86
HLA-C-209ENST00000495835 LRFN3Q9BTN0 628 aa26.69■■□□□ 1.86
HLA-C-209ENST00000495835 HERC2P3Q9BVR0 1158 aa26.69■■□□□ 1.86
HLA-C-209ENST00000495835 ADAM7Q9H2U9 754 aa26.69■■□□□ 1.86
HLA-C-209ENST00000495835 TTLL13PA6NNM8 815 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 HIP1RO75146 1068 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 C1RP00736 705 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 COL9A1P20849 921 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 NPTX2P47972 431 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 DMP1Q13316 513 aaPredicted RBP26.68■■□□□ 1.86
HLA-C-209ENST00000495835 HERC4Q5GLZ8 1057 aaPredicted RBP26.68■■□□□ 1.86
HLA-C-209ENST00000495835 DAW1Q8N136 415 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 AUTS2Q8WXX7 1259 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 INTS4Q96HW7 963 aaKnown RBP26.68■■□□□ 1.86
HLA-C-209ENST00000495835 CDK5RAP3Q96JB5 506 aa26.68■■□□□ 1.86
HLA-C-209ENST00000495835 PRG3Q9Y2Y8 225 aaPredicted RBP26.68■■□□□ 1.86
HLA-C-209ENST00000495835 URODP06132 367 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 PEX3P56589 373 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 ATF7IP2Q5U623 682 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 KCNK18Q7Z418 384 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 RNF135Q8IUD6 432 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 KLHL5Q96PQ7 755 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 PNMA5Q96PV4 448 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 ARHGAP28Q9P2N2 729 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 TNFSF13BQ9Y275 285 aa26.67■■□□□ 1.86
HLA-C-209ENST00000495835 CCDC169A6NNP5 214 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 PRR33A8MZF0 331 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 MAPK7Q13164 816 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 TUSC3Q13454 348 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 NT5DC1Q5TFE4 455 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 RUSC1Q9BVN2 902 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 POLD4Q9HCU8 107 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 C11orf16Q9NQ32 467 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 KMT5AQ9NQR1 393 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 CHST7Q9NS84 486 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 SNTG2Q9NY99 539 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 KLK14Q9P0G3 267 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 DPP7Q9UHL4 492 aa26.66■■□□□ 1.86
HLA-C-209ENST00000495835 THP07101 528 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 CNPP09543 421 aaKnown RBP26.65■■□□□ 1.86
HLA-C-209ENST00000495835 LIG1P18858 919 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 KLRC2P26717 231 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 LONP1P36776 959 aaKnown RBP26.65■■□□□ 1.86
HLA-C-209ENST00000495835 MTHFRP42898 656 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 TMEM119Q4V9L6 283 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 KIAA0319Q5VV43 1072 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 CABP7Q86V35 215 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 SPIRE2Q8WWL2 714 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 CALML4Q96GE6 196 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 RIPOR3Q96MK2 946 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 KIFC3Q9BVG8 833 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 RXFP1Q9HBX9 757 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 ADAM28Q9UKQ2 775 aa26.65■■□□□ 1.86
HLA-C-209ENST00000495835 TRIOO75962 3097 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 MYH11P35749 1972 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 RECQL4O94761 1208 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 EDN1P05305 212 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms