RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 FBXO41Q8TF61 875 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 HPS3Q969F9 1004 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 ST6GALNAC2Q9UJ37 374 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 MAGEL2Q9UJ55 1249 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 RBM8AQ9Y5S9 174 aaKnown RBP7.5□□□□□ -1.21
CCDC39-207ENST00000495817 A0A0A6YYK5 440 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-207ENST00000495817 C1QTNF3-AMACRE9PGA6 284 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 SEC24DO94855 1032 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-207ENST00000495817 ZNF20P17024 532 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 COMTP21964 271 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 NRG3P56975 720 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 BPIFB4P59827 614 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 HDAC1Q13547 482 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-207ENST00000495817 UBE4AQ14139 1066 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 ADRM1Q16186 407 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 MUM1L1Q5H9M0 696 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 BTNL9Q6UXG8 535 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 FUKQ8N0W3 1084 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 PRR18Q8N4B5 295 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 PPM1NQ8N819 430 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 PLA2G15Q8NCC3 412 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 Q8TCH9 128 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 OR14A2Q96R54 314 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 TAAR9Q96RI9 348 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 SOX7Q9BT81 388 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 GTPBP4Q9BZE4 634 aaKnown RBP7.49□□□□□ -1.21
CCDC39-207ENST00000495817 KLC2Q9H0B6 622 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 DEF6Q9H4E7 631 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 SAP30BPQ9UHR5 308 aaKnown RBP7.49□□□□□ -1.21
CCDC39-207ENST00000495817 EVLQ9UI08 416 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-207ENST00000495817 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 SERPINB13Q9UIV8 391 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 JAG2Q9Y219 1238 aa7.49□□□□□ -1.21
CCDC39-207ENST00000495817 C2orf78A6NCI8 922 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 DTNBO60941 627 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 JUNP05412 331 aaKnown RBP7.48□□□□□ -1.21
CCDC39-207ENST00000495817 VSIG10L2P0DP72 767 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 PDCP20941 246 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 ATP2C1P98194 919 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-207ENST00000495817 RIN1Q13671 783 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 UAP1L1Q3KQV9 507 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 USP45Q70EL2 814 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 GAREM2Q75VX8 874 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 ADGRE4PQ86SQ3 457 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 GLB1L2Q8IW92 636 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 GPR135Q8IZ08 494 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 WWC2-AS2Q96NR7 200 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 MAP3K14Q99558 947 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 ZNF700Q9H0M5 742 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 TSC22D4Q9Y3Q8 395 aa7.48□□□□□ -1.21
CCDC39-207ENST00000495817 CTNND1O60716 968 aaKnown RBP7.47□□□□□ -1.21
CCDC39-207ENST00000495817 TOX4O94842 621 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 TRIM27P14373 513 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 MCAMP43121 646 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 GJC2Q5T442 439 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-207ENST00000495817 KSR2Q6VAB6 950 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 CATIPQ7Z7H3 387 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 ANKRD53Q8N9V6 530 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 EDAQ92838 391 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 TTC17Q96AE7 1141 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 FAM89AQ96GI7 184 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 FAM193BQ96PV7 902 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-207ENST00000495817 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 SARGQ9BW04 601 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 GREM2Q9H772 168 aa7.47□□□□□ -1.21
CCDC39-207ENST00000495817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC39-207ENST00000495817 A0A1W2PRX2 142 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 NRP1O14786 923 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 MUSKO15146 869 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 HNRNPLP14866 589 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC39-207ENST00000495817 KIR2DL3P43628 341 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 RHBDL3P58872 404 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 ADAM8P78325 824 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 MEF2AQ02078 507 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-207ENST00000495817 ZNF267Q14586 743 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-207ENST00000495817 GRM7Q14831 915 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 GRM3Q14832 879 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 CHST15Q7LFX5 561 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-207ENST00000495817 DIS3LQ8TF46 1054 aaKnown RBP7.46□□□□□ -1.22
CCDC39-207ENST00000495817 C1GALT1C1Q96EU7 318 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 MVB12AQ96EY5 273 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 MPHOSPH9Q99550 1183 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 ADI1Q9BV57 179 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 MAN1C1Q9NR34 630 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 PLA2G3Q9NZ20 509 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 TESMINQ9Y4I5 508 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 IPPQ9Y573 584 aa7.46□□□□□ -1.22
CCDC39-207ENST00000495817 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-207ENST00000495817 FRMPD2Q68DX3 1309 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-207ENST00000495817 PEX14O75381 377 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 GAAP10253 952 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 CCT2P78371 535 aaKnown RBP7.45□□□□□ -1.22
CCDC39-207ENST00000495817 HHEXQ03014 270 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 KRT40Q6A162 431 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 CYB5RLQ6IPT4 315 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 FAM180AQ6UWF9 173 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 LMBR1LQ6UX01 489 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 SRGAP1Q7Z6B7 1085 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 GLB1L3Q8NCI6 653 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms