RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 LTBP2Q14767 1821 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 CLDN3O15551 220 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 CSDE1O75534 798 aaKnown RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 TOM1L1O75674 476 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 LDHAP00338 332 aaKnown RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 PIGRP01833 764 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 NR3C1P04150 777 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 TPM3P06753 285 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 EPB41P11171 864 aaKnown RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 ZSCAN20P17040 1043 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 IBSPP21815 317 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 GARTP22102 1010 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 NR2F2P24468 414 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 STX17P56962 302 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 MBTD1Q05BQ5 628 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 ADAM9Q13443 819 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 GSE1Q14687 1217 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 NFIL3Q16649 462 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 ATF7IP2Q5U623 682 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 ANKRD40Q6AI12 368 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 NOTUMQ6P988 496 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■□□□□ 9.5
ACTN4-207ENST00000495553 HERC6Q8IVU3 1022 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 HACE1Q8IYU2 909 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 RNF214Q8ND24 703 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 GLIS3Q8NEA6 775 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 CCDC51Q96ER9 411 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 TRIM6Q9C030 488 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 CCDC113Q9H0I3 377 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 KCTD10Q9H3F6 313 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 FZD8Q9H461 694 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 THAP9Q9H5L6 903 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 IFT122Q9HBG6 1241 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 AGPAT3Q9NRZ7 376 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-207ENST00000495553 ANKFY1Q9P2R3 1169 aa10.36□□□□□ -0.75
ACTN4-207ENST00000495553 ADGRA3Q8IWK6 1321 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 CNTNAP2Q9UHC6 1331 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 RBAK-RBAKDNI3L0D1 243 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 SOX1O00570 391 aaPredicted RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 ENPP3O14638 875 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 SLC16A3O15427 465 aaKnown RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 TLL1O43897 1013 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 EXOC3O60645 756 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 UPP2O95045 317 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 KRT13P13646 458 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 PRKCSHP14314 528 aaPredicted RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 FGFR4P22455 802 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 PSMC2P35998 433 aaKnown RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 CYP2J2P51589 502 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 DEFB103AP81534 67 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 NOLC1Q14978 699 aaKnown RBP eCLIP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 RAB30Q15771 203 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 UVSSAQ2YD98 709 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 DCAF4L1Q3SXM0 396 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 CCDC40Q4G0X9 1142 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 FILIP1LQ4L180 1135 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 FAM109BQ6ICB4 259 aaPredicted RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 TTI2Q6NXR4 508 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 FAM117BQ6P1L5 589 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 MPZL3Q6UWV2 235 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 LUZP1Q86V48 1076 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 CREBRFQ8IUR6 639 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 C12orf56Q8IXR9 622 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 XXYLT1Q8NBI6 393 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 LRCH3Q96II8 777 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 ACO2Q99798 780 aaKnown RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 ADAM2Q99965 735 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 SRRTQ9BXP5 876 aaKnown RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 FGFBP2Q9BYJ0 223 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 TSPYL2Q9H2G4 693 aaPredicted RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 TMX1Q9H3N1 280 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 SEMA6BQ9H3T3 888 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 METTL14Q9HCE5 456 aaKnown RBP10.35□□□□□ -0.75
ACTN4-207ENST00000495553 CHST12Q9NRB3 414 aa10.35□□□□□ -0.75
ACTN4-207ENST00000495553 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-207ENST00000495553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-207ENST00000495553 STX10O60499 249 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 GJB5O95377 273 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 SERPINC1P01008 464 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 MCF2P10911 925 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 SKIP12755 728 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 EEF1GP26641 437 aaKnown RBP10.34□□□□□ -0.75
ACTN4-207ENST00000495553 MTIF2P46199 727 aaKnown RBP10.34□□□□□ -0.75
ACTN4-207ENST00000495553 FXR1P51114 621 aaKnown RBP eCLIP10.34□□□□□ -0.752e-7■■□□□ 11.9
ACTN4-207ENST00000495553 RABGGTBP53611 331 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 KCNA1Q09470 495 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 ZNF568Q3ZCX4 644 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 CEP135Q66GS9 1140 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 SLC27A1Q6PCB7 646 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 SLC24A5Q71RS6 500 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 TMCO2Q7Z6W1 182 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-207ENST00000495553 FILIP1Q7Z7B0 1213 aa10.34□□□□□ -0.75
ACTN4-207ENST00000495553 DHX40Q8IX18 779 aaKnown RBP10.34□□□□□ -0.75
ACTN4-207ENST00000495553 TMEM174Q8WUU8 243 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms