RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 GIT1Q9Y2X7 761 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 OTOGLQ3ZCN5 2332 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 SLC37A4O43826 429 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 TSPAN1O60635 241 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 MLH1P40692 756 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 SCNN1GP51170 649 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 STARD6P59095 220 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 CREMQ03060 361 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 SSRP1Q08945 709 aaKnown RBP17.68■□□□□ 0.42
COL4A2-209ENST00000494852 NCBP1Q09161 790 aaKnown RBP17.68■□□□□ 0.42
COL4A2-209ENST00000494852 USP41Q3LFD5 358 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 NOTUMQ6P988 496 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 OTUD6AQ7L8S5 288 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 PJA1Q8NG27 643 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 SHDQ96IW2 340 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 NCOA5Q9HCD5 579 aaKnown RBP17.68■□□□□ 0.42
COL4A2-209ENST00000494852 ZSWIM6Q9HCJ5 1215 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 KCNMB3Q9NPA1 279 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 NUMBLQ9Y6R0 609 aa17.68■□□□□ 0.42
COL4A2-209ENST00000494852 MTCL1Q9Y4B5 1905 aaKnown RBP17.68■□□□□ 0.42
COL4A2-209ENST00000494852 F8W810 466 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 DEXIO95424 95 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 YWHABP31946 246 aaKnown RBP17.67■□□□□ 0.42
COL4A2-209ENST00000494852 PTENP60484 403 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 POU5F1BQ06416 359 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 MXD4Q14582 209 aaPredicted RBP17.67■□□□□ 0.42
COL4A2-209ENST00000494852 EMC2Q15006 297 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 NPY5RQ15761 445 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 RUFY3Q7L099 469 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 GET4Q7L5D6 327 aaPredicted RBP17.67■□□□□ 0.42
COL4A2-209ENST00000494852 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 GPR62Q9BZJ7 368 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
COL4A2-209ENST00000494852 DLL3Q9NYJ7 618 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 HES2Q9Y543 173 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 FANCMQ8IYD8 2048 aa17.67■□□□□ 0.42
COL4A2-209ENST00000494852 ZMYND10O75800 440 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 GLULP15104 373 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 EPHA7Q15375 998 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 INF2Q27J81 1249 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 ZNF528Q3MIS6 628 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 PPP4R3AQ6IN85 833 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 KRT25Q7Z3Z0 450 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
COL4A2-209ENST00000494852 HACE1Q8IYU2 909 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 MAML2Q8IZL2 1156 aaPredicted RBP17.66■□□□□ 0.42
COL4A2-209ENST00000494852 SUMF1Q8NBK3 374 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 GSTCDQ8NEC7 633 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 B3GALT6Q96L58 329 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 MTRQ99707 1265 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 LXNQ9BS40 222 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 TM6SF1Q9BZW5 370 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 ADAM28Q9UKQ2 775 aa17.66■□□□□ 0.42
COL4A2-209ENST00000494852 CEP250Q9BV73 2442 aa17.65■□□□□ 0.42
COL4A2-209ENST00000494852 TBX3O15119 743 aa17.65■□□□□ 0.42
COL4A2-209ENST00000494852 FSHRP23945 695 aa17.65■□□□□ 0.42
COL4A2-209ENST00000494852 CPB2Q96IY4 423 aa17.65■□□□□ 0.42
COL4A2-209ENST00000494852 FOXQ1Q9C009 403 aa17.65■□□□□ 0.42
COL4A2-209ENST00000494852 BMP2KQ9NSY1 1161 aaPredicted RBP17.65■□□□□ 0.42
COL4A2-209ENST00000494852 ZMYM2Q9UBW7 1377 aa17.65■□□□□ 0.42
COL4A2-209ENST00000494852 TDRD15B5MCY1 1934 aaKnown RBP17.64■□□□□ 0.42
COL4A2-209ENST00000494852 POTEMA6NI47 508 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 GCFC2P16383 781 aaKnown RBP17.64■□□□□ 0.41
COL4A2-209ENST00000494852 GPC5P78333 572 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 TFDP1Q14186 410 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 AMHR2Q16671 573 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 XKR9Q5GH70 373 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 GLYCTKQ8IVS8 523 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 HAS1Q92839 578 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 FGF14Q92915 247 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 RPP25Q9BUL9 199 aaKnown RBP17.64■□□□□ 0.41
COL4A2-209ENST00000494852 DDX23Q9BUQ8 820 aaKnown RBP17.64■□□□□ 0.41
COL4A2-209ENST00000494852 NFKBIZQ9BYH8 718 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 TRIM6Q9C030 488 aaPredicted RBP17.64■□□□□ 0.41
COL4A2-209ENST00000494852 ZSWIM4Q9H7M6 989 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 CDH7Q9ULB5 785 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
COL4A2-209ENST00000494852 NCOR2Q9Y618 2525 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 KANSL1LA0AUZ9 987 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 INO80B-WBP1J3KQ70 363 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 CPLX1O14810 134 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 KINO60870 393 aaKnown RBP17.63■□□□□ 0.41
COL4A2-209ENST00000494852 HNRNPA1P09651 372 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL4A2-209ENST00000494852 ARF4P18085 180 aaPredicted RBP17.63■□□□□ 0.41
COL4A2-209ENST00000494852 RPL17P18621 184 aaKnown RBP17.63■□□□□ 0.41
COL4A2-209ENST00000494852 PRKCQQ04759 706 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 MBTD1Q05BQ5 628 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 GRIK3Q13003 919 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 TOB2Q14106 344 aaPredicted RBP17.63■□□□□ 0.41
COL4A2-209ENST00000494852 PARM1Q6UWI2 310 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 NEK8Q86SG6 692 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 DCLK2Q8N568 766 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 APOL6Q9BWW8 343 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 OSBPL6Q9BZF3 934 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 NXF3Q9H4D5 531 aaKnown RBP17.63■□□□□ 0.41
COL4A2-209ENST00000494852 XPNPEP1Q9NQW7 623 aa17.63■□□□□ 0.41
COL4A2-209ENST00000494852 RGL1Q9NZL6 768 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms