RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SNTG2Q9NY99 539 aa17.5■□□□□ 0.39
LIME1-209ENST00000494776 KLK14Q9P0G3 267 aa17.5■□□□□ 0.39
LIME1-209ENST00000494776 TNFSF13BQ9Y275 285 aa17.5■□□□□ 0.39
LIME1-209ENST00000494776 MYMKA6NI61 221 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 NT5C1B-RDH14C9J2C7 533 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 SCP2P22307 547 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 MATR3P43243 847 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIME1-209ENST00000494776 SCNN1GP51170 649 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 AFF1P51825 1210 aaKnown RBP17.49■□□□□ 0.39
LIME1-209ENST00000494776 ZNF131P52739 623 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 NCKAP1LP55160 1127 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 UBE3AQ05086 875 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 ZNF568Q3ZCX4 644 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 LEO1Q8WVC0 666 aaPredicted RBP17.49■□□□□ 0.39
LIME1-209ENST00000494776 CHAMP1Q96JM3 812 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 ZFP42Q96MM3 310 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 CUEDC2Q9H467 287 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 GDAQ9Y2T3 454 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 KIAA1671Q9BY89 1806 aa17.49■□□□□ 0.39
LIME1-209ENST00000494776 CUL9Q8IWT3 2517 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
LIME1-209ENST00000494776 NR1I2O75469 434 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 ALDH2P05091 517 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 HARSP12081 509 aaKnown RBP17.48■□□□□ 0.39
LIME1-209ENST00000494776 IDEP14735 1019 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 ABCD1P33897 745 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 AMPD3Q01432 767 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 PLCB3Q01970 1234 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 TPRNQ4KMQ1 711 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 MRPS27Q92552 414 aaKnown RBP17.48■□□□□ 0.39
LIME1-209ENST00000494776 PPP2R3CQ969Q6 453 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 TMEM169Q96HH4 297 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 SCAND2PQ9GZW5 306 aaPredicted RBP17.48■□□□□ 0.39
LIME1-209ENST00000494776 PRDM6Q9NQX0 595 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 TLR9Q9NR96 1032 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 DNAJB4Q9UDY4 337 aa17.48■□□□□ 0.39
LIME1-209ENST00000494776 RECQL4O94761 1208 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 DDHD2O94830 711 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 GALTP07902 379 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 GAP43P17677 238 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 DNAJB1P25685 340 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 LIG4P49917 911 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 YARSP54577 528 aaKnown RBP17.47■□□□□ 0.39
LIME1-209ENST00000494776 OSTNP61366 133 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 BMS1Q14692 1282 aaKnown RBP17.47■□□□□ 0.39
LIME1-209ENST00000494776 TCEAL5Q5H9L2 206 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 MPZL3Q6UWV2 235 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 SFR1Q86XK3 245 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 SLC39A11Q8N1S5 342 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 STAMQ92783 540 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
LIME1-209ENST00000494776 TMEM175Q9BSA9 504 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 CCDC94Q9BW85 323 aaPredicted RBP17.47■□□□□ 0.39
LIME1-209ENST00000494776 CDT1Q9H211 546 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 TNMDQ9H2S6 317 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 ENTPD7Q9NQZ7 604 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 MIOSQ9NXC5 875 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 ANKFY1Q9P2R3 1169 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 THEGQ9P2T0 379 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 TBX20Q9UMR3 447 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 LZTS1Q9Y250 596 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 FAN1Q9Y2M0 1017 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 MYH11P35749 1972 aa17.47■□□□□ 0.39
LIME1-209ENST00000494776 PRRC2BQ5JSZ5 2229 aaKnown RBP17.46■□□□□ 0.39
LIME1-209ENST00000494776 INPPL1O15357 1258 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 CLDN3O15551 220 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 TOM1L1O75674 476 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 MCF2P10911 925 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 NMT1P30419 496 aaKnown RBP17.46■□□□□ 0.39
LIME1-209ENST00000494776 CA8P35219 290 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 ANP32AP39687 249 aaKnown RBP17.46■□□□□ 0.39
LIME1-209ENST00000494776 OR1G1P47890 313 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 SLC11A1P49279 550 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 GRIK3Q13003 919 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 E2F4Q16254 413 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 HERC4Q5GLZ8 1057 aaPredicted RBP17.46■□□□□ 0.39
LIME1-209ENST00000494776 ADALQ6DHV7 355 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 ZPBP2Q6X784 338 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 EP400NLQ6ZTU2 488 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 HLA-CQ95604 372 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 ZBTB45Q96K62 511 aaPredicted RBP17.46■□□□□ 0.39
LIME1-209ENST00000494776 MRPL44Q9H9J2 332 aaKnown RBP17.46■□□□□ 0.39
LIME1-209ENST00000494776 PTPRHQ9HD43 1115 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 PANK4Q9NVE7 773 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 TBC1D7Q9P0N9 293 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 SEL1LQ9UBV2 794 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 KCNH3Q9ULD8 1083 aa17.46■□□□□ 0.39
LIME1-209ENST00000494776 ZMYM2Q9UBW7 1377 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 HNRNPDLO14979 420 aaKnown RBP17.45■□□□□ 0.38
LIME1-209ENST00000494776 IRS1P35568 1242 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 GRM5P41594 1212 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 CAMK1Q14012 370 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.38
LIME1-209ENST00000494776 PLPP4Q5VZY2 271 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 PDE12Q6L8Q7 609 aaKnown RBP17.45■□□□□ 0.38
LIME1-209ENST00000494776 TMC7Q7Z402 723 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms