RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 FIBCD1Q8N539 461 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 TMEM87AQ8NBN3 555 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 NOC3LQ8WTT2 800 aaKnown RBP12.2□□□□□ -0.46
APTX-230ENST00000494649 CASD1Q96PB1 797 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 GAD1Q99259 594 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 CDT1Q9H211 546 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 PRDM12Q9H4Q4 367 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
APTX-230ENST00000494649 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 XIRP2A4UGR9 3374 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 MYO9BQ13459 2157 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 KLRC4O43908 158 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 RAB27AP51159 221 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 UBE2HP62256 183 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 GTF2BQ00403 316 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 POSTNQ15063 836 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 CAMK4Q16566 473 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 GLRA4Q5JXX5 417 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 FAM26FQ5R3K3 315 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 ZBTB41Q5SVQ8 909 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 SLC39A4Q6P5W5 647 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 RABGGTAQ92696 567 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 ELAC1Q9H777 363 aaKnown RBP12.19□□□□□ -0.46
APTX-230ENST00000494649 RSAD1Q9HA92 442 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 TNFSF13BQ9Y275 285 aa12.19□□□□□ -0.46
APTX-230ENST00000494649 NT5C1B-RDH14C9J2C7 533 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
APTX-230ENST00000494649 OFD1O75665 1012 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 EOMESO95936 686 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 RPN1P04843 607 aaKnown RBP12.18□□□□□ -0.46
APTX-230ENST00000494649 SCNN1GP51170 649 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 DPYDQ12882 1025 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 STK4Q13043 487 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 GLB1LQ6UWU2 654 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
APTX-230ENST00000494649 SYCP3Q8IZU3 236 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 SEMA6BQ9H3T3 888 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 PTPRHQ9HD43 1115 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 MIOSQ9NXC5 875 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 SEL1LQ9UBV2 794 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 USP25Q9UHP3 1055 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 REV3LO60673 3130 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 ARL5CA6NH57 179 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 H0YCG3 227 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 ABLIM1O14639 778 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 CLDN3O15551 220 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 B4GALT3O60512 393 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
APTX-230ENST00000494649 ZNF623O75123 536 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
APTX-230ENST00000494649 TOM1L1O75674 476 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 PPP1R37O75864 691 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 RECQL4O94761 1208 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 CTNNB1P35222 781 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 TNFSF9P41273 254 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 RNASELQ05823 741 aaKnown RBP12.18□□□□□ -0.46
APTX-230ENST00000494649 SPAG1Q07617 926 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 MPZL3Q6UWV2 235 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 ZNF280BQ86YH2 543 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 TMEM130Q8N3G9 435 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 ZSWIM2Q8NEG5 633 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 PGBD4Q96DM1 585 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 GBP4Q96PP9 640 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 KCNG1Q9UIX4 513 aa12.18□□□□□ -0.46
APTX-230ENST00000494649 SKIP12755 728 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
APTX-230ENST00000494649 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
APTX-230ENST00000494649 KIAA0895Q8NCT3 520 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
APTX-230ENST00000494649 CCDC51Q96ER9 411 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 TMEM117Q9H0C3 514 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 PCIF1Q9H4Z3 704 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 LMBRD1Q9NUN5 540 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 TBC1D13Q9NVG8 400 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 DNAJB4Q9UDY4 337 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 FNDC1Q4ZHG4 1894 aaPredicted RBP12.17□□□□□ -0.46
APTX-230ENST00000494649 LINC00271P0C7V0 271 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 PROZP22891 400 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 HOXD13P35453 343 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 ACOT2P49753 483 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 EHHADHQ08426 723 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 EPC2Q52LR7 807 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 NOMO2Q5JPE7 1267 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 L1TD1Q5T7N2 865 aaKnown RBP12.17□□□□□ -0.46
APTX-230ENST00000494649 CMTR2Q8IYT2 770 aaKnown RBP12.17□□□□□ -0.46
APTX-230ENST00000494649 SCFD1Q8WVM8 642 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 MYLIPQ8WY64 445 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 POMGNT1Q8WZA1 660 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 SAAL1Q96ER3 474 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
APTX-230ENST00000494649 TGS1Q96RS0 853 aaKnown RBP12.17□□□□□ -0.46
APTX-230ENST00000494649 STRA6Q9BX79 667 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms