RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 NCOR1O75376 2440 aa36.6■■■■□ 3.45
CBX4-203ENST00000494546 K7ERI5 159 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 CTSAP10619 480 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 UBA7P41226 1012 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 MAPK7Q13164 816 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 TMEM119Q4V9L6 283 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 EEF1DP3Q658K8 133 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 SYT2Q8N9I0 419 aaPredicted RBP36.59■■■■□ 3.45
CBX4-203ENST00000494546 TMEM87AQ8NBN3 555 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 RPS6KC1Q96S38 1066 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 PRKAG3Q9UGI9 489 aa36.59■■■■□ 3.45
CBX4-203ENST00000494546 PLA2G4BP0C869 781 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 GRIN1Q05586 938 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 DSC1Q08554 894 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 KCNC3Q14003 757 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 NT5DC1Q5TFE4 455 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 GSTCDQ8NEC7 633 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 CALML4Q96GE6 196 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 TIPINQ9BVW5 301 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 KMT5AQ9NQR1 393 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 SNTG2Q9NY99 539 aa36.58■■■■□ 3.45
CBX4-203ENST00000494546 SFI1A8K8P3 1242 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 GUCY2CP25092 1073 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 ZP2Q05996 745 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 RESTQ13127 1097 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 ATF7IP2Q5U623 682 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 TMEM184AQ6ZMB5 413 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 ADHFE1Q8IWW8 467 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 MARCH5Q9NX47 278 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 CLIC4Q9Y696 253 aa36.57■■■■□ 3.44
CBX4-203ENST00000494546 CLASP2O75122 1294 aaKnown RBP36.56■■■■□ 3.44
CBX4-203ENST00000494546 NR1I2O75469 434 aa36.56■■■■□ 3.44
CBX4-203ENST00000494546 LONP1P36776 959 aaKnown RBP36.56■■■■□ 3.44
CBX4-203ENST00000494546 SLC12A3P55017 1021 aa36.56■■■■□ 3.44
CBX4-203ENST00000494546 GIT2Q14161 759 aa36.56■■■■□ 3.44
CBX4-203ENST00000494546 ANKRD54Q6NXT1 300 aa36.56■■■■□ 3.44
CBX4-203ENST00000494546 STK39Q9UEW8 545 aa36.56■■■■□ 3.44
CBX4-203ENST00000494546 USP15Q9Y4E8 981 aaPredicted RBP36.56■■■■□ 3.44
CBX4-203ENST00000494546 PHLPP2Q6ZVD8 1323 aa36.56■■■■□ 3.44
CBX4-203ENST00000494546 ZMYM2Q9UBW7 1377 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 SLC26A4O43511 780 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 GRIK3Q13003 919 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 FAM173BQ6P4H8 233 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 RASSF8Q8NHQ8 419 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 C17orf75Q9HAS0 396 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 HCFC2Q9Y5Z7 792 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 IRAK3Q9Y616 596 aa36.55■■■■□ 3.44
CBX4-203ENST00000494546 RECQL4O94761 1208 aa36.54■■■■□ 3.44
CBX4-203ENST00000494546 DCAF4L1Q3SXM0 396 aa36.54■■■■□ 3.44
CBX4-203ENST00000494546 CASP10Q92851 521 aa36.54■■■■□ 3.44
CBX4-203ENST00000494546 KHSRPQ92945 711 aaKnown RBP eCLIP36.54■■■■□ 3.44
CBX4-203ENST00000494546 APOL5Q9BWW9 433 aa36.54■■■■□ 3.44
CBX4-203ENST00000494546 ARHGAP28Q9P2N2 729 aa36.54■■■■□ 3.44
CBX4-203ENST00000494546 RBM19Q9Y4C8 960 aaKnown RBP36.54■■■■□ 3.44
CBX4-203ENST00000494546 SLC16A4O15374 487 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 PTPN14Q15678 1187 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 EPHX3Q9H6B9 360 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 TMEM134Q9H6X4 195 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 KCND2Q9NZV8 630 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 MTMR6Q9Y217 621 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 GDAQ9Y2T3 454 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 BDP1A6H8Y1 2624 aa36.53■■■■□ 3.44
CBX4-203ENST00000494546 TDRD15B5MCY1 1934 aaKnown RBP36.52■■■■□ 3.44
CBX4-203ENST00000494546 NPHP3-ACAD11A0A0J9YXS1 232 aa36.52■■■■□ 3.44
CBX4-203ENST00000494546 F8W810 466 aa36.52■■■■□ 3.44
CBX4-203ENST00000494546 DHX8Q14562 1220 aaKnown RBP36.52■■■■□ 3.44
CBX4-203ENST00000494546 KARSQ15046 597 aaKnown RBP36.52■■■■□ 3.44
CBX4-203ENST00000494546 SNX21Q969T3 373 aa36.52■■■■□ 3.44
CBX4-203ENST00000494546 COLEC11Q9BWP8 271 aa36.52■■■■□ 3.44
CBX4-203ENST00000494546 MRPL4Q9BYD3 311 aaKnown RBP36.52■■■■□ 3.44
CBX4-203ENST00000494546 PLS3P13797 630 aa36.51■■■■□ 3.44
CBX4-203ENST00000494546 MARCKSP29966 332 aaPredicted RBP36.51■■■■□ 3.44
CBX4-203ENST00000494546 CACNB1Q02641 598 aaPredicted RBP36.51■■■■□ 3.44
CBX4-203ENST00000494546 CEBPZQ03701 1054 aaKnown RBP36.51■■■■□ 3.44
CBX4-203ENST00000494546 PTPAQ15257 358 aa36.51■■■■□ 3.44
CBX4-203ENST00000494546 SYCE2Q6PIF2 218 aa36.51■■■■□ 3.44
CBX4-203ENST00000494546 TAS1R3Q7RTX0 852 aa36.51■■■■□ 3.44
CBX4-203ENST00000494546 APBB1IPQ7Z5R6 666 aaPredicted RBP36.51■■■■□ 3.44
CBX4-203ENST00000494546 POP1Q99575 1024 aaKnown RBP36.51■■■■□ 3.44
CBX4-203ENST00000494546 TNFSF13BQ9Y275 285 aa36.51■■■■□ 3.44
CBX4-203ENST00000494546 C19orf67A6NJJ6 358 aa36.5■■■■□ 3.43
CBX4-203ENST00000494546 STX6O43752 255 aa36.5■■■■□ 3.43
CBX4-203ENST00000494546 SOD2P04179 222 aa36.5■■■■□ 3.43
CBX4-203ENST00000494546 PLCG1P19174 1290 aa36.5■■■■□ 3.43
CBX4-203ENST00000494546 RABGGTAQ92696 567 aa36.5■■■■□ 3.43
CBX4-203ENST00000494546 ACO2Q99798 780 aaKnown RBP36.5■■■■□ 3.43
CBX4-203ENST00000494546 MRPL17Q9NRX2 175 aaKnown RBP36.5■■■■□ 3.43
CBX4-203ENST00000494546 C2CD2LO14523 706 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 HOXB8P17481 243 aaPredicted RBP36.49■■■■□ 3.43
CBX4-203ENST00000494546 SMTNP53814 917 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 ARSHQ5FYA8 562 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 TAS1R1Q7RTX1 841 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 GPBP1Q86WP2 473 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 LRRC15Q8TF66 581 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 SPIRE2Q8WWL2 714 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 HERC2P3Q9BVR0 1158 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 TARS2Q9BW92 718 aaKnown RBP36.49■■■■□ 3.43
CBX4-203ENST00000494546 EMILIN2Q9BXX0 1053 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 S1PR5Q9H228 398 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 CXCL16Q9H2A7 254 aa36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms