RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ARF4P18085 180 aaPredicted RBP14.05□□□□□ -0.16
SKA1-205ENST00000494518 ATP2B1P20020 1258 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 GLRA2P23416 452 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 TXKP42681 527 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 GLUD2P49448 558 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 TFDP1Q14186 410 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
SKA1-205ENST00000494518 AMHR2Q16671 573 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 ME3Q16798 604 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
SKA1-205ENST00000494518 OTOP3Q7RTS5 596 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 PALB2Q86YC2 1186 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 CNNM3Q8NE01 707 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 ST13P5Q8NFI4 369 aaPredicted RBP14.05□□□□□ -0.16
SKA1-205ENST00000494518 WASF1Q92558 559 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 CSRNP2Q9H175 543 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 BRMS1Q9HCU9 246 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 GPRC5CQ9NQ84 441 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 PCDHA12Q9UN75 941 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 VWA8A3KMH1 1905 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 CCDC195A0A1B0GUA6 201 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 POTEMA6NI47 508 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 BTBD18B2RXH4 712 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 NARSO43776 548 aaKnown RBP14.04□□□□□ -0.16
SKA1-205ENST00000494518 ST18O60284 1047 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 GLUD1P00367 558 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 ADH1AP07327 375 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 RPL17P18621 184 aaKnown RBP14.04□□□□□ -0.16
SKA1-205ENST00000494518 GBP2P32456 591 aaPredicted RBP14.04□□□□□ -0.16
SKA1-205ENST00000494518 ARL2P36404 184 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 DSC1Q08554 894 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 NCBP1Q09161 790 aaKnown RBP14.04□□□□□ -0.16
SKA1-205ENST00000494518 CWF19L1Q69YN2 538 aaKnown RBP14.04□□□□□ -0.16
SKA1-205ENST00000494518 RSAD2Q8WXG1 361 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 CCDC51Q96ER9 411 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 TTC12Q9H892 705 aaPredicted RBP14.04□□□□□ -0.16
SKA1-205ENST00000494518 KCNK12Q9HB15 430 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 PARP2Q9UGN5 583 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 FBXL21Q9UKT6 434 aa14.04□□□□□ -0.16
SKA1-205ENST00000494518 EP300Q09472 2414 aaPredicted RBP14.04□□□□□ -0.16
SKA1-205ENST00000494518 MYH15Q9Y2K3 1946 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 PI15O43692 258 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 NEMFO60524 1076 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 DGAT1O75907 488 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 AXLP30530 894 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 RARRES1P49788 294 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 TDGQ13569 410 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 KIAA0319Q5VV43 1072 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 FUT10Q6P4F1 479 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 ASCL5Q7RTU5 278 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 DIS3L2Q8IYB7 885 aaKnown RBP14.03□□□□□ -0.16
SKA1-205ENST00000494518 RNF168Q8IYW5 571 aaPredicted RBP14.03□□□□□ -0.16
SKA1-205ENST00000494518 NSUN7Q8NE18 718 aaKnown RBP14.03□□□□□ -0.16
SKA1-205ENST00000494518 HASPINQ8TF76 798 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
SKA1-205ENST00000494518 GTF3C6Q969F1 213 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 MYADMQ96S97 322 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 HSD17B14Q9BPX1 270 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 GPR62Q9BZJ7 368 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 TMEM60Q9H2L4 133 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 ANKEF1Q9NU02 776 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 STK39Q9UEW8 545 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 DUSP12Q9UNI6 340 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 USP20Q9Y2K6 914 aa14.03□□□□□ -0.16
SKA1-205ENST00000494518 CLUHO75153 1309 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 EFEMP2O95967 443 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 CFHP08603 1231 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 LIG1P18858 919 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 DSG1Q02413 1049 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 ANKRD1Q15327 319 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 C15orf39Q6ZRI6 1047 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 FRMD5Q7Z6J6 570 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
SKA1-205ENST00000494518 HACE1Q8IYU2 909 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 SIX5Q8N196 739 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 GSTCDQ8NEC7 633 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 RIN2Q8WYP3 895 aaPredicted RBP14.02□□□□□ -0.17
SKA1-205ENST00000494518 PAAF1Q9BRP4 392 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 COLEC11Q9BWP8 271 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 IRF2BPLQ9H1B7 796 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 PIDD1Q9HB75 910 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 RXFP1Q9HBX9 757 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 GIT1Q9Y2X7 761 aa14.02□□□□□ -0.17
SKA1-205ENST00000494518 CASTOR2A6NHX0 329 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 TGM5O43548 720 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 NR1I2O75469 434 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 LYPLA2O95372 231 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
SKA1-205ENST00000494518 NPR3P17342 541 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 MCM7P33993 719 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 TRIM29Q14134 588 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 TMEM132AQ24JP5 1023 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 SLC27A1Q6PCB7 646 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 PRSS55Q6UWB4 352 aaPredicted RBP14.01□□□□□ -0.17
SKA1-205ENST00000494518 GET4Q7L5D6 327 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms