RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-215ENST00000494058 CT47A1Q5JQC4 288 aaPredicted RBP14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 C9orf50Q5SZB4 431 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 ARMCX5Q6P1M9 558 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 MLKLQ8NB16 471 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 RNF169Q8NCN4 708 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 SCFD1Q8WVM8 642 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 HPS3Q969F9 1004 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 DHTKD1Q96HY7 919 aaPredicted RBP14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 TSPAN18Q96SJ8 248 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 YME1L1Q96TA2 773 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 MRPL9Q9BYD2 267 aaKnown RBP14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 PTPRHQ9HD43 1115 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 TYW1Q9NV66 732 aaKnown RBP14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 MSRAQ9UJ68 235 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 MAN1B1Q9UKM7 699 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 IPPQ9Y573 584 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 STYXL1Q9Y6J8 313 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 SCN5AQ14524 2016 aa14.36□□□□□ -0.11
SKIV2L-215ENST00000494058 A0A0B4J269 797 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 TLL1O43897 1013 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 GRM5P41594 1212 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 MORC3Q14149 939 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 UBXN11Q5T124 520 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 ZBTB33Q86T24 672 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 CD302Q8IX05 232 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 NELFCDQ8IXH7 590 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 KIAA0895Q8NCT3 520 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 TMEM174Q8WUU8 243 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 LINC01599Q8WXQ3 324 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 ACAP3Q96P50 834 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 RPS6KC1Q96S38 1066 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 TMEM117Q9H0C3 514 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 PRO3102Q9H379 93 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 RSAD1Q9HA92 442 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 CXXC1Q9P0U4 656 aaPredicted RBP14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 PARP2Q9UGN5 583 aa14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 AGO2Q9UKV8 859 aaKnown RBP14.35□□□□□ -0.11
SKIV2L-215ENST00000494058 FGFR1OPO95684 399 aaKnown RBP14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 IBSPP21815 317 aaPredicted RBP14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 SMAD3P84022 425 aaKnown RBP14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 LRRC63Q05C16 580 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 SURF1Q15526 300 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 LRIT3Q3SXY7 679 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 CAVIN1Q6NZI2 390 aaKnown RBP14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 USP37Q86T82 979 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 C12orf56Q8IXR9 622 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 EIF2AQ9BY44 585 aaKnown RBP14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 CDT1Q9H211 546 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 RPF1Q9H9Y2 349 aaKnown RBP14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 PLEKHA5Q9HAU0 1116 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 RWDD3Q9Y3V2 267 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 PCDHA11Q9Y5I1 949 aa14.34□□□□□ -0.11
SKIV2L-215ENST00000494058 BIN1O00499 593 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 DGKIO75912 1065 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 HARSP12081 509 aaKnown RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 PRCPP42785 496 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 DEFB103AP81534 67 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 KCNA1Q09470 495 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 TCTN1Q2MV58 587 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 EDRF1Q3B7T1 1238 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 EEF1DP3Q658K8 133 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 FOXR2Q6PJQ5 311 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 RBM43Q6ZSC3 357 aaKnown RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 ZNF598Q86UK7 904 aaKnown RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 CDR2LQ86X02 465 aaPredicted RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 SLC9A9Q8IVB4 645 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 CMTR2Q8IYT2 770 aaKnown RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 ADSSL1Q8N142 457 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 GPD1LQ8N335 351 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 XXYLT1Q8NBI6 393 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 SMG8Q8ND04 991 aaKnown RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 ERCC4Q92889 916 aaPredicted RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 NAT10Q9H0A0 1025 aaKnown RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 AGPAT3Q9NRZ7 376 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 SLC38A7Q9NVC3 462 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 MAPK8IP1Q9UQF2 711 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 COLQQ9Y215 455 aaPredicted RBP14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 TRAF3IP3Q9Y228 551 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 FRMD4BQ9Y2L6 1034 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 GDAQ9Y2T3 454 aa14.33□□□□□ -0.12
SKIV2L-215ENST00000494058 ZNF233A6NK53 670 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 TTLL13PA6NNM8 815 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 ANKRD63C9JTQ0 380 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 XPOTO43592 962 aaKnown RBP14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 EXTL3O43909 919 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 IL18RAPO95256 599 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 EDN1P05305 212 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 NLRP12P59046 1061 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 HTRA4P83105 476 aaPredicted RBP14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 RNASELQ05823 741 aaKnown RBP14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 PPP2R3AQ06190 1150 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 NFIL3Q16649 462 aa14.32□□□□□ -0.12
SKIV2L-215ENST00000494058 NOMO2Q5JPE7 1267 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms